Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5218 | 15877;15878;15879 | chr2:178733737;178733736;178733735 | chr2:179598464;179598463;179598462 |
N2AB | 4901 | 14926;14927;14928 | chr2:178733737;178733736;178733735 | chr2:179598464;179598463;179598462 |
N2A | 3974 | 12145;12146;12147 | chr2:178733737;178733736;178733735 | chr2:179598464;179598463;179598462 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.991 | N | 0.807 | 0.422 | 0.796026131282 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
F/V | rs1210028177 | -1.093 | 0.939 | N | 0.724 | 0.414 | 0.718756738305 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
F/V | rs1210028177 | -1.093 | 0.939 | N | 0.724 | 0.414 | 0.718756738305 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7507 | likely_pathogenic | 0.8176 | pathogenic | -1.433 | Destabilizing | 0.953 | D | 0.746 | deleterious | None | None | None | None | N |
F/C | 0.473 | ambiguous | 0.5491 | ambiguous | -0.769 | Destabilizing | 0.999 | D | 0.811 | deleterious | D | 0.545431868 | None | None | N |
F/D | 0.9067 | likely_pathogenic | 0.9379 | pathogenic | 0.712 | Stabilizing | 0.998 | D | 0.83 | deleterious | None | None | None | None | N |
F/E | 0.9308 | likely_pathogenic | 0.9462 | pathogenic | 0.743 | Stabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
F/G | 0.8795 | likely_pathogenic | 0.9212 | pathogenic | -1.685 | Destabilizing | 0.993 | D | 0.799 | deleterious | None | None | None | None | N |
F/H | 0.6286 | likely_pathogenic | 0.6929 | pathogenic | -0.131 | Destabilizing | 0.986 | D | 0.796 | deleterious | None | None | None | None | N |
F/I | 0.2923 | likely_benign | 0.3437 | ambiguous | -0.741 | Destabilizing | 0.982 | D | 0.751 | deleterious | N | 0.507893411 | None | None | N |
F/K | 0.9213 | likely_pathogenic | 0.9436 | pathogenic | -0.488 | Destabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
F/L | 0.8618 | likely_pathogenic | 0.8946 | pathogenic | -0.741 | Destabilizing | 0.885 | D | 0.629 | neutral | N | 0.509214071 | None | None | N |
F/M | 0.6351 | likely_pathogenic | 0.6863 | pathogenic | -0.611 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
F/N | 0.7566 | likely_pathogenic | 0.8132 | pathogenic | -0.457 | Destabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | N |
F/P | 0.9901 | likely_pathogenic | 0.9958 | pathogenic | -0.955 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
F/Q | 0.8668 | likely_pathogenic | 0.8967 | pathogenic | -0.491 | Destabilizing | 0.998 | D | 0.829 | deleterious | None | None | None | None | N |
F/R | 0.8382 | likely_pathogenic | 0.8789 | pathogenic | 0.019 | Stabilizing | 0.993 | D | 0.833 | deleterious | None | None | None | None | N |
F/S | 0.5655 | likely_pathogenic | 0.6561 | pathogenic | -1.302 | Destabilizing | 0.991 | D | 0.807 | deleterious | N | 0.484419953 | None | None | N |
F/T | 0.6588 | likely_pathogenic | 0.7283 | pathogenic | -1.183 | Destabilizing | 0.993 | D | 0.812 | deleterious | None | None | None | None | N |
F/V | 0.2912 | likely_benign | 0.3413 | ambiguous | -0.955 | Destabilizing | 0.939 | D | 0.724 | prob.delet. | N | 0.504805548 | None | None | N |
F/W | 0.6247 | likely_pathogenic | 0.6745 | pathogenic | -0.143 | Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | N |
F/Y | 0.1725 | likely_benign | 0.208 | benign | -0.234 | Destabilizing | 0.046 | N | 0.373 | neutral | N | 0.445097862 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.