Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5219 | 15880;15881;15882 | chr2:178733734;178733733;178733732 | chr2:179598461;179598460;179598459 |
N2AB | 4902 | 14929;14930;14931 | chr2:178733734;178733733;178733732 | chr2:179598461;179598460;179598459 |
N2A | 3975 | 12148;12149;12150 | chr2:178733734;178733733;178733732 | chr2:179598461;179598460;179598459 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs759581032 | -0.041 | 0.055 | N | 0.283 | 0.219 | 0.15556083564 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 5.79E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/P | rs759581032 | -0.041 | 0.055 | N | 0.283 | 0.219 | 0.15556083564 | gnomAD-4.0.0 | 3.18225E-06 | None | None | None | None | N | None | 0 | 4.57268E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0629 | likely_benign | 0.0755 | benign | -0.232 | Destabilizing | None | N | 0.075 | neutral | N | 0.510326482 | None | None | N |
S/C | 0.0981 | likely_benign | 0.1098 | benign | -0.372 | Destabilizing | 0.612 | D | 0.319 | neutral | D | 0.632341433 | None | None | N |
S/D | 0.1762 | likely_benign | 0.1756 | benign | 0.462 | Stabilizing | None | N | 0.068 | neutral | None | None | None | None | N |
S/E | 0.2014 | likely_benign | 0.2196 | benign | 0.369 | Stabilizing | None | N | 0.069 | neutral | None | None | None | None | N |
S/F | 0.1199 | likely_benign | 0.1403 | benign | -0.927 | Destabilizing | 0.295 | N | 0.373 | neutral | D | 0.631433287 | None | None | N |
S/G | 0.0869 | likely_benign | 0.088 | benign | -0.305 | Destabilizing | 0.016 | N | 0.246 | neutral | None | None | None | None | N |
S/H | 0.1752 | likely_benign | 0.176 | benign | -0.661 | Destabilizing | 0.356 | N | 0.325 | neutral | None | None | None | None | N |
S/I | 0.0976 | likely_benign | 0.1037 | benign | -0.174 | Destabilizing | 0.072 | N | 0.348 | neutral | None | None | None | None | N |
S/K | 0.2967 | likely_benign | 0.3249 | benign | -0.258 | Destabilizing | 0.016 | N | 0.204 | neutral | None | None | None | None | N |
S/L | 0.0762 | likely_benign | 0.0852 | benign | -0.174 | Destabilizing | 0.016 | N | 0.312 | neutral | None | None | None | None | N |
S/M | 0.1393 | likely_benign | 0.1661 | benign | -0.195 | Destabilizing | 0.356 | N | 0.328 | neutral | None | None | None | None | N |
S/N | 0.1005 | likely_benign | 0.087 | benign | -0.095 | Destabilizing | 0.016 | N | 0.187 | neutral | None | None | None | None | N |
S/P | 0.3274 | likely_benign | 0.4616 | ambiguous | -0.167 | Destabilizing | 0.055 | N | 0.283 | neutral | N | 0.51420548 | None | None | N |
S/Q | 0.2212 | likely_benign | 0.2353 | benign | -0.263 | Destabilizing | 0.038 | N | 0.17 | neutral | None | None | None | None | N |
S/R | 0.2442 | likely_benign | 0.2481 | benign | -0.09 | Destabilizing | 0.072 | N | 0.292 | neutral | None | None | None | None | N |
S/T | 0.066 | likely_benign | 0.0699 | benign | -0.209 | Destabilizing | None | N | 0.103 | neutral | N | 0.502918738 | None | None | N |
S/V | 0.098 | likely_benign | 0.1172 | benign | -0.167 | Destabilizing | 0.016 | N | 0.312 | neutral | None | None | None | None | N |
S/W | 0.2026 | likely_benign | 0.2509 | benign | -0.993 | Destabilizing | 0.864 | D | 0.373 | neutral | None | None | None | None | N |
S/Y | 0.1142 | likely_benign | 0.1349 | benign | -0.669 | Destabilizing | 0.295 | N | 0.365 | neutral | D | 0.589990332 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.