Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5223 | 15892;15893;15894 | chr2:178733722;178733721;178733720 | chr2:179598449;179598448;179598447 |
N2AB | 4906 | 14941;14942;14943 | chr2:178733722;178733721;178733720 | chr2:179598449;179598448;179598447 |
N2A | 3979 | 12160;12161;12162 | chr2:178733722;178733721;178733720 | chr2:179598449;179598448;179598447 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs749315462 | None | 0.698 | N | 0.637 | 0.176 | 0.300110245524 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs749315462 | -1.078 | 0.032 | D | 0.484 | 0.219 | 0.341934017632 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65563E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6649 | likely_pathogenic | 0.6823 | pathogenic | -0.559 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
A/D | 0.9762 | likely_pathogenic | 0.9843 | pathogenic | -1.26 | Destabilizing | 0.956 | D | 0.769 | deleterious | None | None | None | None | N |
A/E | 0.9603 | likely_pathogenic | 0.9722 | pathogenic | -1.114 | Destabilizing | 0.942 | D | 0.727 | prob.delet. | D | 0.537784147 | None | None | N |
A/F | 0.8264 | likely_pathogenic | 0.8463 | pathogenic | -0.498 | Destabilizing | 0.978 | D | 0.773 | deleterious | None | None | None | None | N |
A/G | 0.2492 | likely_benign | 0.2752 | benign | -1.147 | Destabilizing | 0.822 | D | 0.641 | neutral | D | 0.542407635 | None | None | N |
A/H | 0.9715 | likely_pathogenic | 0.9765 | pathogenic | -1.559 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
A/I | 0.5749 | likely_pathogenic | 0.6404 | pathogenic | 0.443 | Stabilizing | 0.754 | D | 0.705 | prob.neutral | None | None | None | None | N |
A/K | 0.9853 | likely_pathogenic | 0.9896 | pathogenic | -0.703 | Destabilizing | 0.956 | D | 0.727 | prob.delet. | None | None | None | None | N |
A/L | 0.5402 | ambiguous | 0.5856 | pathogenic | 0.443 | Stabilizing | 0.754 | D | 0.695 | prob.neutral | None | None | None | None | N |
A/M | 0.598 | likely_pathogenic | 0.6604 | pathogenic | 0.305 | Stabilizing | 0.994 | D | 0.749 | deleterious | None | None | None | None | N |
A/N | 0.9308 | likely_pathogenic | 0.9494 | pathogenic | -0.77 | Destabilizing | 0.956 | D | 0.769 | deleterious | None | None | None | None | N |
A/P | 0.9365 | likely_pathogenic | 0.9629 | pathogenic | 0.106 | Stabilizing | 0.971 | D | 0.752 | deleterious | D | 0.624299646 | None | None | N |
A/Q | 0.9462 | likely_pathogenic | 0.9563 | pathogenic | -0.641 | Destabilizing | 0.978 | D | 0.753 | deleterious | None | None | None | None | N |
A/R | 0.9661 | likely_pathogenic | 0.973 | pathogenic | -0.818 | Destabilizing | 0.956 | D | 0.753 | deleterious | None | None | None | None | N |
A/S | 0.237 | likely_benign | 0.27 | benign | -1.248 | Destabilizing | 0.698 | D | 0.637 | neutral | N | 0.446252385 | None | None | N |
A/T | 0.2581 | likely_benign | 0.3164 | benign | -0.971 | Destabilizing | 0.032 | N | 0.484 | neutral | D | 0.536653701 | None | None | N |
A/V | 0.268 | likely_benign | 0.308 | benign | 0.106 | Stabilizing | 0.126 | N | 0.489 | neutral | N | 0.479796228 | None | None | N |
A/W | 0.9847 | likely_pathogenic | 0.9884 | pathogenic | -1.183 | Destabilizing | 0.998 | D | 0.758 | deleterious | None | None | None | None | N |
A/Y | 0.9379 | likely_pathogenic | 0.948 | pathogenic | -0.58 | Destabilizing | 0.993 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.