Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5229 | 15910;15911;15912 | chr2:178733704;178733703;178733702 | chr2:179598431;179598430;179598429 |
N2AB | 4912 | 14959;14960;14961 | chr2:178733704;178733703;178733702 | chr2:179598431;179598430;179598429 |
N2A | 3985 | 12178;12179;12180 | chr2:178733704;178733703;178733702 | chr2:179598431;179598430;179598429 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs373355675 | -0.235 | 0.051 | N | 0.217 | 0.167 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/A | rs373355675 | -0.235 | 0.051 | N | 0.217 | 0.167 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/A | rs373355675 | -0.235 | 0.051 | N | 0.217 | 0.167 | None | gnomAD-4.0.0 | 3.84297E-06 | None | None | None | None | N | None | 5.07288E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/H | None | None | 0.966 | N | 0.351 | 0.201 | 0.241664281697 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1031 | likely_benign | 0.1294 | benign | -0.408 | Destabilizing | 0.051 | N | 0.217 | neutral | N | 0.448130819 | None | None | N |
D/C | 0.4304 | ambiguous | 0.5617 | ambiguous | 0.007 | Stabilizing | 0.998 | D | 0.398 | neutral | None | None | None | None | N |
D/E | 0.1061 | likely_benign | 0.129 | benign | -0.393 | Destabilizing | 0.625 | D | 0.283 | neutral | N | 0.417194422 | None | None | N |
D/F | 0.42 | ambiguous | 0.5248 | ambiguous | -0.259 | Destabilizing | 0.991 | D | 0.42 | neutral | None | None | None | None | N |
D/G | 0.1075 | likely_benign | 0.1365 | benign | -0.643 | Destabilizing | 0.005 | N | 0.153 | neutral | N | 0.441650357 | None | None | N |
D/H | 0.1598 | likely_benign | 0.2087 | benign | -0.228 | Destabilizing | 0.966 | D | 0.351 | neutral | N | 0.458048444 | None | None | N |
D/I | 0.2841 | likely_benign | 0.3934 | ambiguous | 0.174 | Stabilizing | 0.949 | D | 0.45 | neutral | None | None | None | None | N |
D/K | 0.2097 | likely_benign | 0.2568 | benign | 0.25 | Stabilizing | 0.842 | D | 0.337 | neutral | None | None | None | None | N |
D/L | 0.2861 | likely_benign | 0.3638 | ambiguous | 0.174 | Stabilizing | 0.842 | D | 0.42 | neutral | None | None | None | None | N |
D/M | 0.428 | ambiguous | 0.5352 | ambiguous | 0.408 | Stabilizing | 0.998 | D | 0.394 | neutral | None | None | None | None | N |
D/N | 0.0709 | likely_benign | 0.0792 | benign | -0.171 | Destabilizing | 0.005 | N | 0.101 | neutral | N | 0.374986688 | None | None | N |
D/P | 0.6467 | likely_pathogenic | 0.7576 | pathogenic | 0.003 | Stabilizing | 0.974 | D | 0.391 | neutral | None | None | None | None | N |
D/Q | 0.1888 | likely_benign | 0.2349 | benign | -0.105 | Destabilizing | 0.974 | D | 0.351 | neutral | None | None | None | None | N |
D/R | 0.2232 | likely_benign | 0.2776 | benign | 0.39 | Stabilizing | 0.949 | D | 0.429 | neutral | None | None | None | None | N |
D/S | 0.0871 | likely_benign | 0.1063 | benign | -0.272 | Destabilizing | 0.525 | D | 0.329 | neutral | None | None | None | None | N |
D/T | 0.1599 | likely_benign | 0.215 | benign | -0.08 | Destabilizing | 0.029 | N | 0.159 | neutral | None | None | None | None | N |
D/V | 0.1701 | likely_benign | 0.2316 | benign | 0.003 | Stabilizing | 0.801 | D | 0.421 | neutral | N | 0.45759062 | None | None | N |
D/W | 0.774 | likely_pathogenic | 0.8536 | pathogenic | -0.087 | Destabilizing | 0.998 | D | 0.474 | neutral | None | None | None | None | N |
D/Y | 0.1729 | likely_benign | 0.2076 | benign | -0.011 | Destabilizing | 0.989 | D | 0.416 | neutral | N | 0.448101598 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.