Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5233 | 15922;15923;15924 | chr2:178733692;178733691;178733690 | chr2:179598419;179598418;179598417 |
N2AB | 4916 | 14971;14972;14973 | chr2:178733692;178733691;178733690 | chr2:179598419;179598418;179598417 |
N2A | 3989 | 12190;12191;12192 | chr2:178733692;178733691;178733690 | chr2:179598419;179598418;179598417 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.007 | N | 0.198 | 0.074 | 0.233785782151 | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85817E-06 | 0 | 0 |
S/R | None | None | 0.884 | N | 0.33 | 0.126 | 0.343560092441 | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | I | None | 5.65419E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.079 | likely_benign | 0.0837 | benign | -0.217 | Destabilizing | 0.373 | N | 0.409 | neutral | None | None | None | None | I |
S/C | 0.118 | likely_benign | 0.1357 | benign | -0.458 | Destabilizing | 0.994 | D | 0.377 | neutral | D | 0.59733168 | None | None | I |
S/D | 0.145 | likely_benign | 0.1713 | benign | 0.458 | Stabilizing | 0.59 | D | 0.296 | neutral | None | None | None | None | I |
S/E | 0.24 | likely_benign | 0.2664 | benign | 0.384 | Stabilizing | 0.742 | D | 0.286 | neutral | None | None | None | None | I |
S/F | 0.1718 | likely_benign | 0.2086 | benign | -0.913 | Destabilizing | 0.953 | D | 0.402 | neutral | None | None | None | None | I |
S/G | 0.0691 | likely_benign | 0.0719 | benign | -0.297 | Destabilizing | 0.007 | N | 0.198 | neutral | N | 0.450519715 | None | None | I |
S/H | 0.1735 | likely_benign | 0.2031 | benign | -0.505 | Destabilizing | 0.02 | N | 0.297 | neutral | None | None | None | None | I |
S/I | 0.1038 | likely_benign | 0.1193 | benign | -0.137 | Destabilizing | 0.939 | D | 0.411 | neutral | D | 0.574248589 | None | None | I |
S/K | 0.3118 | likely_benign | 0.3533 | ambiguous | -0.197 | Destabilizing | 0.742 | D | 0.309 | neutral | None | None | None | None | I |
S/L | 0.1009 | likely_benign | 0.1132 | benign | -0.137 | Destabilizing | 0.742 | D | 0.369 | neutral | None | None | None | None | I |
S/M | 0.1824 | likely_benign | 0.203 | benign | -0.313 | Destabilizing | 0.996 | D | 0.343 | neutral | None | None | None | None | I |
S/N | 0.0743 | likely_benign | 0.0744 | benign | -0.136 | Destabilizing | 0.003 | N | 0.183 | neutral | N | 0.455020772 | None | None | I |
S/P | 0.1188 | likely_benign | 0.1368 | benign | -0.138 | Destabilizing | 0.984 | D | 0.337 | neutral | None | None | None | None | I |
S/Q | 0.258 | likely_benign | 0.2864 | benign | -0.258 | Destabilizing | 0.91 | D | 0.342 | neutral | None | None | None | None | I |
S/R | 0.246 | likely_benign | 0.2849 | benign | 0.009 | Stabilizing | 0.884 | D | 0.33 | neutral | N | 0.447548311 | None | None | I |
S/T | 0.0723 | likely_benign | 0.0801 | benign | -0.231 | Destabilizing | 0.684 | D | 0.355 | neutral | N | 0.458135937 | None | None | I |
S/V | 0.1304 | likely_benign | 0.1533 | benign | -0.138 | Destabilizing | 0.953 | D | 0.381 | neutral | None | None | None | None | I |
S/W | 0.2679 | likely_benign | 0.3275 | benign | -1.007 | Destabilizing | 0.996 | D | 0.554 | neutral | None | None | None | None | I |
S/Y | 0.1436 | likely_benign | 0.1703 | benign | -0.659 | Destabilizing | 0.835 | D | 0.409 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.