Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5234 | 15925;15926;15927 | chr2:178733689;178733688;178733687 | chr2:179598416;179598415;179598414 |
N2AB | 4917 | 14974;14975;14976 | chr2:178733689;178733688;178733687 | chr2:179598416;179598415;179598414 |
N2A | 3990 | 12193;12194;12195 | chr2:178733689;178733688;178733687 | chr2:179598416;179598415;179598414 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | None | N | 0.236 | 0.1 | 0.0762999501168 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.0907 | likely_benign | 0.0937 | benign | -1.854 | Destabilizing | 0.007 | N | 0.486 | neutral | None | None | None | None | N |
F/C | 0.081 | likely_benign | 0.0888 | benign | -1.208 | Destabilizing | 0.56 | D | 0.699 | prob.neutral | N | 0.442620588 | None | None | N |
F/D | 0.1421 | likely_benign | 0.1707 | benign | -0.096 | Destabilizing | 0.072 | N | 0.637 | neutral | None | None | None | None | N |
F/E | 0.2943 | likely_benign | 0.3784 | ambiguous | -0.013 | Destabilizing | 0.016 | N | 0.602 | neutral | None | None | None | None | N |
F/G | 0.2174 | likely_benign | 0.2645 | benign | -2.16 | Highly Destabilizing | 0.016 | N | 0.569 | neutral | None | None | None | None | N |
F/H | 0.1273 | likely_benign | 0.1724 | benign | -0.328 | Destabilizing | None | N | 0.321 | neutral | None | None | None | None | N |
F/I | 0.0743 | likely_benign | 0.0917 | benign | -0.952 | Destabilizing | 0.012 | N | 0.473 | neutral | N | 0.442521436 | None | None | N |
F/K | 0.3574 | ambiguous | 0.4816 | ambiguous | -1.121 | Destabilizing | 0.016 | N | 0.601 | neutral | None | None | None | None | N |
F/L | 0.2261 | likely_benign | 0.318 | benign | -0.952 | Destabilizing | None | N | 0.236 | neutral | N | 0.364162894 | None | None | N |
F/M | 0.1384 | likely_benign | 0.1647 | benign | -0.877 | Destabilizing | 0.12 | N | 0.538 | neutral | None | None | None | None | N |
F/N | 0.1223 | likely_benign | 0.1349 | benign | -1.257 | Destabilizing | 0.016 | N | 0.602 | neutral | None | None | None | None | N |
F/P | 0.6094 | likely_pathogenic | 0.7911 | pathogenic | -1.244 | Destabilizing | 0.136 | N | 0.695 | prob.neutral | None | None | None | None | N |
F/Q | 0.2296 | likely_benign | 0.3094 | benign | -1.225 | Destabilizing | 0.072 | N | 0.693 | prob.neutral | None | None | None | None | N |
F/R | 0.2666 | likely_benign | 0.372 | ambiguous | -0.564 | Destabilizing | 0.072 | N | 0.676 | prob.neutral | None | None | None | None | N |
F/S | 0.0598 | likely_benign | 0.0576 | benign | -2.082 | Highly Destabilizing | None | N | 0.387 | neutral | N | 0.300739745 | None | None | N |
F/T | 0.0897 | likely_benign | 0.0941 | benign | -1.9 | Destabilizing | 0.016 | N | 0.543 | neutral | None | None | None | None | N |
F/V | 0.0682 | likely_benign | 0.0784 | benign | -1.244 | Destabilizing | 0.012 | N | 0.487 | neutral | N | 0.391704703 | None | None | N |
F/W | 0.176 | likely_benign | 0.2441 | benign | -0.137 | Destabilizing | 0.628 | D | 0.554 | neutral | None | None | None | None | N |
F/Y | 0.0745 | likely_benign | 0.0786 | benign | -0.405 | Destabilizing | 0.012 | N | 0.497 | neutral | N | 0.391240278 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.