Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5236 | 15931;15932;15933 | chr2:178733683;178733682;178733681 | chr2:179598410;179598409;179598408 |
N2AB | 4919 | 14980;14981;14982 | chr2:178733683;178733682;178733681 | chr2:179598410;179598409;179598408 |
N2A | 3992 | 12199;12200;12201 | chr2:178733683;178733682;178733681 | chr2:179598410;179598409;179598408 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs755295120 | -0.068 | 0.048 | D | 0.716 | 0.558 | 0.365317461125 | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | I | None | 0 | 2.02969E-04 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
G/D | rs755295120 | -0.068 | 0.048 | D | 0.716 | 0.558 | 0.365317461125 | gnomAD-4.0.0 | 1.43219E-05 | None | None | None | None | I | None | 0 | 1.82924E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43336E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1975 | likely_benign | 0.395 | ambiguous | -0.466 | Destabilizing | 0.873 | D | 0.787 | deleterious | D | 0.709237922 | None | None | I |
G/C | 0.366 | ambiguous | 0.667 | pathogenic | -0.772 | Destabilizing | 0.998 | D | 0.789 | deleterious | D | 0.872828345 | None | None | I |
G/D | 0.1686 | likely_benign | 0.4796 | ambiguous | -0.515 | Destabilizing | 0.048 | N | 0.716 | prob.delet. | D | 0.796337085 | None | None | I |
G/E | 0.312 | likely_benign | 0.616 | pathogenic | -0.583 | Destabilizing | 0.941 | D | 0.851 | deleterious | None | None | None | None | I |
G/F | 0.8118 | likely_pathogenic | 0.955 | pathogenic | -0.783 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | I |
G/H | 0.6005 | likely_pathogenic | 0.8933 | pathogenic | -0.974 | Destabilizing | 0.996 | D | 0.8 | deleterious | None | None | None | None | I |
G/I | 0.7032 | likely_pathogenic | 0.9222 | pathogenic | -0.145 | Destabilizing | 0.996 | D | 0.833 | deleterious | None | None | None | None | I |
G/K | 0.6521 | likely_pathogenic | 0.8704 | pathogenic | -1.01 | Destabilizing | 0.97 | D | 0.854 | deleterious | None | None | None | None | I |
G/L | 0.6954 | likely_pathogenic | 0.9091 | pathogenic | -0.145 | Destabilizing | 0.97 | D | 0.819 | deleterious | None | None | None | None | I |
G/M | 0.7431 | likely_pathogenic | 0.9241 | pathogenic | -0.236 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | I |
G/N | 0.3465 | ambiguous | 0.7039 | pathogenic | -0.652 | Destabilizing | 0.941 | D | 0.863 | deleterious | None | None | None | None | I |
G/P | 0.9576 | likely_pathogenic | 0.9899 | pathogenic | -0.21 | Destabilizing | 0.985 | D | 0.847 | deleterious | None | None | None | None | I |
G/Q | 0.433 | ambiguous | 0.7211 | pathogenic | -0.8 | Destabilizing | 0.97 | D | 0.837 | deleterious | None | None | None | None | I |
G/R | 0.5072 | ambiguous | 0.7695 | pathogenic | -0.728 | Destabilizing | 0.96 | D | 0.84 | deleterious | D | 0.8727793 | None | None | I |
G/S | 0.1344 | likely_benign | 0.2667 | benign | -0.953 | Destabilizing | 0.924 | D | 0.87 | deleterious | D | 0.822084198 | None | None | I |
G/T | 0.4082 | ambiguous | 0.6869 | pathogenic | -0.926 | Destabilizing | 0.97 | D | 0.856 | deleterious | None | None | None | None | I |
G/V | 0.5425 | ambiguous | 0.8383 | pathogenic | -0.21 | Destabilizing | 0.98 | D | 0.816 | deleterious | D | 0.872828345 | None | None | I |
G/W | 0.7002 | likely_pathogenic | 0.915 | pathogenic | -1.119 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | I |
G/Y | 0.6528 | likely_pathogenic | 0.9235 | pathogenic | -0.689 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.