Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5240 | 15943;15944;15945 | chr2:178733671;178733670;178733669 | chr2:179598398;179598397;179598396 |
N2AB | 4923 | 14992;14993;14994 | chr2:178733671;178733670;178733669 | chr2:179598398;179598397;179598396 |
N2A | 3996 | 12211;12212;12213 | chr2:178733671;178733670;178733669 | chr2:179598398;179598397;179598396 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | None | None | 1.0 | D | 0.861 | 0.747 | 0.905871212908 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.8502 | likely_pathogenic | 0.8619 | pathogenic | -1.892 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
C/D | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -1.41 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
C/E | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.188 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
C/F | 0.6601 | likely_pathogenic | 0.7345 | pathogenic | -1.142 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.82200527 | None | None | N |
C/G | 0.8245 | likely_pathogenic | 0.8369 | pathogenic | -2.256 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.82476445 | None | None | N |
C/H | 0.9971 | likely_pathogenic | 0.9977 | pathogenic | -2.35 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
C/I | 0.7421 | likely_pathogenic | 0.7806 | pathogenic | -0.903 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
C/K | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -1.249 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
C/L | 0.6216 | likely_pathogenic | 0.6323 | pathogenic | -0.903 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
C/M | 0.8937 | likely_pathogenic | 0.9119 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
C/N | 0.9965 | likely_pathogenic | 0.9969 | pathogenic | -1.736 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
C/P | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -1.211 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
C/Q | 0.9983 | likely_pathogenic | 0.9986 | pathogenic | -1.324 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
C/R | 0.9957 | likely_pathogenic | 0.9963 | pathogenic | -1.558 | Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.82476445 | None | None | N |
C/S | 0.9487 | likely_pathogenic | 0.9536 | pathogenic | -2.126 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.82476445 | None | None | N |
C/T | 0.9627 | likely_pathogenic | 0.9673 | pathogenic | -1.715 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
C/V | 0.6176 | likely_pathogenic | 0.6681 | pathogenic | -1.211 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
C/W | 0.9874 | likely_pathogenic | 0.9916 | pathogenic | -1.444 | Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.82476445 | None | None | N |
C/Y | 0.9511 | likely_pathogenic | 0.9652 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.82476445 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.