Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5242 | 15949;15950;15951 | chr2:178733665;178733664;178733663 | chr2:179598392;179598391;179598390 |
N2AB | 4925 | 14998;14999;15000 | chr2:178733665;178733664;178733663 | chr2:179598392;179598391;179598390 |
N2A | 3998 | 12217;12218;12219 | chr2:178733665;178733664;178733663 | chr2:179598392;179598391;179598390 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs763604864 | -1.818 | 0.996 | D | 0.696 | 0.8 | 0.611371111137 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
A/T | rs763604864 | -1.818 | 0.996 | D | 0.696 | 0.8 | 0.611371111137 | gnomAD-4.0.0 | 1.59333E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43365E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7825 | likely_pathogenic | 0.7941 | pathogenic | -1.511 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
A/D | 0.9976 | likely_pathogenic | 0.998 | pathogenic | -2.206 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.827716354 | None | None | N |
A/E | 0.9909 | likely_pathogenic | 0.9924 | pathogenic | -2.064 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
A/F | 0.9372 | likely_pathogenic | 0.9391 | pathogenic | -0.895 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
A/G | 0.5387 | ambiguous | 0.5719 | pathogenic | -1.758 | Destabilizing | 0.999 | D | 0.624 | neutral | D | 0.736268177 | None | None | N |
A/H | 0.9965 | likely_pathogenic | 0.9968 | pathogenic | -1.897 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
A/I | 0.4613 | ambiguous | 0.5211 | ambiguous | -0.188 | Destabilizing | 0.994 | D | 0.759 | deleterious | None | None | None | None | N |
A/K | 0.9979 | likely_pathogenic | 0.9985 | pathogenic | -1.39 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
A/L | 0.5035 | ambiguous | 0.5584 | ambiguous | -0.188 | Destabilizing | 0.994 | D | 0.697 | prob.neutral | None | None | None | None | N |
A/M | 0.74 | likely_pathogenic | 0.7761 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
A/N | 0.9936 | likely_pathogenic | 0.9941 | pathogenic | -1.532 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
A/P | 0.9889 | likely_pathogenic | 0.9909 | pathogenic | -0.524 | Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.72123373 | None | None | N |
A/Q | 0.9868 | likely_pathogenic | 0.9887 | pathogenic | -1.455 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
A/R | 0.9908 | likely_pathogenic | 0.9928 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
A/S | 0.5166 | ambiguous | 0.5027 | ambiguous | -2.011 | Highly Destabilizing | 0.998 | D | 0.631 | neutral | D | 0.74639517 | None | None | N |
A/T | 0.5221 | ambiguous | 0.5344 | ambiguous | -1.748 | Destabilizing | 0.996 | D | 0.696 | prob.neutral | D | 0.758803426 | None | None | N |
A/V | 0.2083 | likely_benign | 0.2338 | benign | -0.524 | Destabilizing | 0.884 | D | 0.399 | neutral | D | 0.529581264 | None | None | N |
A/W | 0.9961 | likely_pathogenic | 0.9968 | pathogenic | -1.477 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
A/Y | 0.989 | likely_pathogenic | 0.99 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.