Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5248 | 15967;15968;15969 | chr2:178733647;178733646;178733645 | chr2:179598374;179598373;179598372 |
N2AB | 4931 | 15016;15017;15018 | chr2:178733647;178733646;178733645 | chr2:179598374;179598373;179598372 |
N2A | 4004 | 12235;12236;12237 | chr2:178733647;178733646;178733645 | chr2:179598374;179598373;179598372 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs2080939542 | None | 0.959 | N | 0.288 | 0.193 | 0.247872288689 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/N | rs2080939542 | None | 0.959 | N | 0.288 | 0.193 | 0.247872288689 | gnomAD-4.0.0 | 6.57056E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4699E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0877 | likely_benign | 0.0917 | benign | -0.359 | Destabilizing | 0.863 | D | 0.288 | neutral | None | None | None | None | N |
S/C | 0.1186 | likely_benign | 0.1144 | benign | -0.334 | Destabilizing | 0.999 | D | 0.468 | neutral | D | 0.614950487 | None | None | N |
S/D | 0.5024 | ambiguous | 0.5073 | ambiguous | -0.034 | Destabilizing | 0.939 | D | 0.28 | neutral | None | None | None | None | N |
S/E | 0.461 | ambiguous | 0.4865 | ambiguous | -0.118 | Destabilizing | 0.759 | D | 0.279 | neutral | None | None | None | None | N |
S/F | 0.1461 | likely_benign | 0.1455 | benign | -0.811 | Destabilizing | 0.991 | D | 0.57 | neutral | None | None | None | None | N |
S/G | 0.1233 | likely_benign | 0.1187 | benign | -0.501 | Destabilizing | 0.906 | D | 0.256 | neutral | D | 0.613277725 | None | None | N |
S/H | 0.296 | likely_benign | 0.2841 | benign | -0.964 | Destabilizing | 0.991 | D | 0.472 | neutral | None | None | None | None | N |
S/I | 0.1315 | likely_benign | 0.124 | benign | -0.113 | Destabilizing | 0.134 | N | 0.408 | neutral | N | 0.511614229 | None | None | N |
S/K | 0.4387 | ambiguous | 0.4454 | ambiguous | -0.629 | Destabilizing | 0.17 | N | 0.125 | neutral | None | None | None | None | N |
S/L | 0.0925 | likely_benign | 0.0947 | benign | -0.113 | Destabilizing | 0.759 | D | 0.527 | neutral | None | None | None | None | N |
S/M | 0.1607 | likely_benign | 0.1621 | benign | 0.078 | Stabilizing | 0.991 | D | 0.473 | neutral | None | None | None | None | N |
S/N | 0.138 | likely_benign | 0.129 | benign | -0.327 | Destabilizing | 0.959 | D | 0.288 | neutral | N | 0.514095914 | None | None | N |
S/P | 0.6951 | likely_pathogenic | 0.7167 | pathogenic | -0.165 | Destabilizing | 0.997 | D | 0.435 | neutral | None | None | None | None | N |
S/Q | 0.3446 | ambiguous | 0.3567 | ambiguous | -0.588 | Destabilizing | 0.2 | N | 0.123 | neutral | None | None | None | None | N |
S/R | 0.3657 | ambiguous | 0.3644 | ambiguous | -0.371 | Destabilizing | 0.852 | D | 0.387 | neutral | N | 0.50832044 | None | None | N |
S/T | 0.0805 | likely_benign | 0.0819 | benign | -0.421 | Destabilizing | 0.906 | D | 0.261 | neutral | N | 0.492150445 | None | None | N |
S/V | 0.1455 | likely_benign | 0.1505 | benign | -0.165 | Destabilizing | 0.759 | D | 0.51 | neutral | None | None | None | None | N |
S/W | 0.3345 | likely_benign | 0.3364 | benign | -0.809 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | N |
S/Y | 0.1499 | likely_benign | 0.1486 | benign | -0.549 | Destabilizing | 0.997 | D | 0.57 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.