Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5251 | 15976;15977;15978 | chr2:178733638;178733637;178733636 | chr2:179598365;179598364;179598363 |
N2AB | 4934 | 15025;15026;15027 | chr2:178733638;178733637;178733636 | chr2:179598365;179598364;179598363 |
N2A | 4007 | 12244;12245;12246 | chr2:178733638;178733637;178733636 | chr2:179598365;179598364;179598363 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs770408836 | -0.085 | 0.005 | N | 0.401 | 0.226 | 0.354610295913 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
S/C | rs770408836 | -0.085 | 0.005 | N | 0.401 | 0.226 | 0.354610295913 | gnomAD-4.0.0 | 1.59477E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86727E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0858 | likely_benign | 0.0958 | benign | -0.771 | Destabilizing | 0.267 | N | 0.508 | neutral | N | 0.477052756 | None | None | N |
S/C | 0.0732 | likely_benign | 0.0909 | benign | -0.398 | Destabilizing | 0.005 | N | 0.401 | neutral | N | 0.442771451 | None | None | N |
S/D | 0.8994 | likely_pathogenic | 0.9072 | pathogenic | 0.029 | Stabilizing | 0.971 | D | 0.735 | prob.delet. | None | None | None | None | N |
S/E | 0.9506 | likely_pathogenic | 0.9471 | pathogenic | 0.072 | Stabilizing | 0.971 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/F | 0.5961 | likely_pathogenic | 0.67 | pathogenic | -0.774 | Destabilizing | 0.989 | D | 0.788 | deleterious | D | 0.542548489 | None | None | N |
S/G | 0.1378 | likely_benign | 0.1664 | benign | -1.069 | Destabilizing | 0.915 | D | 0.685 | prob.neutral | None | None | None | None | N |
S/H | 0.8285 | likely_pathogenic | 0.8351 | pathogenic | -1.41 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/I | 0.4108 | ambiguous | 0.4995 | ambiguous | -0.069 | Destabilizing | 0.949 | D | 0.791 | deleterious | None | None | None | None | N |
S/K | 0.986 | likely_pathogenic | 0.9883 | pathogenic | -0.444 | Destabilizing | 0.971 | D | 0.739 | prob.delet. | None | None | None | None | N |
S/L | 0.2451 | likely_benign | 0.3214 | benign | -0.069 | Destabilizing | 0.728 | D | 0.704 | prob.neutral | None | None | None | None | N |
S/M | 0.3867 | ambiguous | 0.471 | ambiguous | 0.089 | Stabilizing | 0.991 | D | 0.747 | deleterious | None | None | None | None | N |
S/N | 0.4766 | ambiguous | 0.4807 | ambiguous | -0.483 | Destabilizing | 0.971 | D | 0.728 | prob.delet. | None | None | None | None | N |
S/P | 0.9654 | likely_pathogenic | 0.9805 | pathogenic | -0.268 | Destabilizing | 0.989 | D | 0.786 | deleterious | D | 0.6870667 | None | None | N |
S/Q | 0.9147 | likely_pathogenic | 0.9199 | pathogenic | -0.534 | Destabilizing | 0.991 | D | 0.76 | deleterious | None | None | None | None | N |
S/R | 0.9626 | likely_pathogenic | 0.9665 | pathogenic | -0.472 | Destabilizing | 0.991 | D | 0.786 | deleterious | None | None | None | None | N |
S/T | 0.112 | likely_benign | 0.1358 | benign | -0.511 | Destabilizing | 0.801 | D | 0.679 | prob.neutral | N | 0.508428844 | None | None | N |
S/V | 0.3043 | likely_benign | 0.3751 | ambiguous | -0.268 | Destabilizing | 0.842 | D | 0.732 | prob.delet. | None | None | None | None | N |
S/W | 0.7761 | likely_pathogenic | 0.8182 | pathogenic | -0.751 | Destabilizing | 0.998 | D | 0.78 | deleterious | None | None | None | None | N |
S/Y | 0.5657 | likely_pathogenic | 0.6077 | pathogenic | -0.466 | Destabilizing | 0.989 | D | 0.766 | deleterious | D | 0.566178997 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.