Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5252 | 15979;15980;15981 | chr2:178733635;178733634;178733633 | chr2:179598362;179598361;179598360 |
N2AB | 4935 | 15028;15029;15030 | chr2:178733635;178733634;178733633 | chr2:179598362;179598361;179598360 |
N2A | 4008 | 12247;12248;12249 | chr2:178733635;178733634;178733633 | chr2:179598362;179598361;179598360 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.001 | N | 0.212 | 0.201 | 0.312608672186 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0899 | likely_benign | 0.0918 | benign | -0.596 | Destabilizing | 0.047 | N | 0.239 | neutral | N | 0.479725794 | None | None | N |
V/C | 0.5601 | ambiguous | 0.6014 | pathogenic | -0.628 | Destabilizing | 0.983 | D | 0.555 | neutral | None | None | None | None | N |
V/D | 0.2094 | likely_benign | 0.2206 | benign | -0.077 | Destabilizing | 0.101 | N | 0.501 | neutral | N | 0.471594416 | None | None | N |
V/E | 0.1569 | likely_benign | 0.1622 | benign | -0.178 | Destabilizing | 0.004 | N | 0.334 | neutral | None | None | None | None | N |
V/F | 0.0928 | likely_benign | 0.0972 | benign | -0.796 | Destabilizing | 0.001 | N | 0.212 | neutral | N | 0.404807557 | None | None | N |
V/G | 0.1481 | likely_benign | 0.1576 | benign | -0.755 | Destabilizing | 0.183 | N | 0.493 | neutral | N | 0.505851624 | None | None | N |
V/H | 0.2997 | likely_benign | 0.3293 | benign | -0.381 | Destabilizing | 0.94 | D | 0.573 | neutral | None | None | None | None | N |
V/I | 0.0688 | likely_benign | 0.0703 | benign | -0.321 | Destabilizing | 0.001 | N | 0.157 | neutral | N | 0.49465076 | None | None | N |
V/K | 0.2072 | likely_benign | 0.2167 | benign | -0.316 | Destabilizing | 0.418 | N | 0.527 | neutral | None | None | None | None | N |
V/L | 0.1316 | likely_benign | 0.1372 | benign | -0.321 | Destabilizing | 0.017 | N | 0.243 | neutral | N | 0.48891841 | None | None | N |
V/M | 0.0901 | likely_benign | 0.0965 | benign | -0.267 | Destabilizing | 0.716 | D | 0.522 | neutral | None | None | None | None | N |
V/N | 0.1481 | likely_benign | 0.1548 | benign | -0.042 | Destabilizing | 0.418 | N | 0.615 | neutral | None | None | None | None | N |
V/P | 0.5369 | ambiguous | 0.5943 | pathogenic | -0.376 | Destabilizing | 0.836 | D | 0.64 | neutral | None | None | None | None | N |
V/Q | 0.1792 | likely_benign | 0.187 | benign | -0.297 | Destabilizing | 0.418 | N | 0.629 | neutral | None | None | None | None | N |
V/R | 0.1786 | likely_benign | 0.1795 | benign | 0.129 | Stabilizing | 0.418 | N | 0.641 | neutral | None | None | None | None | N |
V/S | 0.0966 | likely_benign | 0.1021 | benign | -0.498 | Destabilizing | 0.027 | N | 0.362 | neutral | None | None | None | None | N |
V/T | 0.0845 | likely_benign | 0.0908 | benign | -0.495 | Destabilizing | 0.129 | N | 0.372 | neutral | None | None | None | None | N |
V/W | 0.5227 | ambiguous | 0.5645 | pathogenic | -0.858 | Destabilizing | 0.983 | D | 0.571 | neutral | None | None | None | None | N |
V/Y | 0.3055 | likely_benign | 0.3298 | benign | -0.529 | Destabilizing | 0.264 | N | 0.516 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.