Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5257 | 15994;15995;15996 | chr2:178733620;178733619;178733618 | chr2:179598347;179598346;179598345 |
N2AB | 4940 | 15043;15044;15045 | chr2:178733620;178733619;178733618 | chr2:179598347;179598346;179598345 |
N2A | 4013 | 12262;12263;12264 | chr2:178733620;178733619;178733618 | chr2:179598347;179598346;179598345 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs879227338 | -0.273 | 0.618 | D | 0.721 | 0.666 | 0.32714864917 | gnomAD-2.1.1 | 7.17E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.57E-05 | 0 |
V/L | rs879227338 | -0.273 | 0.618 | D | 0.721 | 0.666 | 0.32714864917 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/L | rs879227338 | -0.273 | 0.618 | D | 0.721 | 0.666 | 0.32714864917 | gnomAD-4.0.0 | 5.14754E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.63155E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6187 | likely_pathogenic | 0.6707 | pathogenic | -1.439 | Destabilizing | 0.958 | D | 0.727 | prob.delet. | D | 0.768521078 | None | None | N |
V/C | 0.9219 | likely_pathogenic | 0.9244 | pathogenic | -1.075 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
V/D | 0.9862 | likely_pathogenic | 0.9894 | pathogenic | -0.91 | Destabilizing | 0.998 | D | 0.866 | deleterious | D | 0.767794125 | None | None | N |
V/E | 0.949 | likely_pathogenic | 0.9582 | pathogenic | -0.856 | Destabilizing | 0.998 | D | 0.862 | deleterious | None | None | None | None | N |
V/F | 0.6506 | likely_pathogenic | 0.673 | pathogenic | -0.897 | Destabilizing | 0.988 | D | 0.865 | deleterious | D | 0.70970468 | None | None | N |
V/G | 0.7843 | likely_pathogenic | 0.8038 | pathogenic | -1.81 | Destabilizing | 0.994 | D | 0.852 | deleterious | D | 0.767794125 | None | None | N |
V/H | 0.9841 | likely_pathogenic | 0.9874 | pathogenic | -1.339 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/I | 0.0826 | likely_benign | 0.091 | benign | -0.504 | Destabilizing | 0.067 | N | 0.545 | neutral | D | 0.561328652 | None | None | N |
V/K | 0.9644 | likely_pathogenic | 0.9714 | pathogenic | -1.123 | Destabilizing | 0.995 | D | 0.861 | deleterious | None | None | None | None | N |
V/L | 0.4373 | ambiguous | 0.4583 | ambiguous | -0.504 | Destabilizing | 0.618 | D | 0.721 | prob.delet. | D | 0.675127638 | None | None | N |
V/M | 0.4623 | ambiguous | 0.5015 | ambiguous | -0.533 | Destabilizing | 0.991 | D | 0.869 | deleterious | None | None | None | None | N |
V/N | 0.9459 | likely_pathogenic | 0.9556 | pathogenic | -0.99 | Destabilizing | 0.998 | D | 0.869 | deleterious | None | None | None | None | N |
V/P | 0.8747 | likely_pathogenic | 0.908 | pathogenic | -0.781 | Destabilizing | 0.998 | D | 0.867 | deleterious | None | None | None | None | N |
V/Q | 0.9361 | likely_pathogenic | 0.9465 | pathogenic | -1.053 | Destabilizing | 0.998 | D | 0.873 | deleterious | None | None | None | None | N |
V/R | 0.9413 | likely_pathogenic | 0.9503 | pathogenic | -0.78 | Destabilizing | 0.998 | D | 0.867 | deleterious | None | None | None | None | N |
V/S | 0.823 | likely_pathogenic | 0.8461 | pathogenic | -1.635 | Destabilizing | 0.995 | D | 0.854 | deleterious | None | None | None | None | N |
V/T | 0.6817 | likely_pathogenic | 0.7223 | pathogenic | -1.458 | Destabilizing | 0.968 | D | 0.812 | deleterious | None | None | None | None | N |
V/W | 0.9843 | likely_pathogenic | 0.9876 | pathogenic | -1.116 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/Y | 0.9556 | likely_pathogenic | 0.9601 | pathogenic | -0.798 | Destabilizing | 0.995 | D | 0.862 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.