Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5262 | 16009;16010;16011 | chr2:178733509;178733508;178733507 | chr2:179598236;179598235;179598234 |
N2AB | 4945 | 15058;15059;15060 | chr2:178733509;178733508;178733507 | chr2:179598236;179598235;179598234 |
N2A | 4018 | 12277;12278;12279 | chr2:178733509;178733508;178733507 | chr2:179598236;179598235;179598234 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.968 | N | 0.659 | 0.262 | 0.325263233342 | gnomAD-4.0.0 | 1.37188E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.8031E-06 | 0 | 0 |
K/R | rs761927504 | 0.205 | 0.026 | N | 0.258 | 0.081 | 0.18274738541 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
K/R | rs761927504 | 0.205 | 0.026 | N | 0.258 | 0.081 | 0.18274738541 | gnomAD-4.0.0 | 6.85938E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52321E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1847 | likely_benign | 0.2102 | benign | -0.074 | Destabilizing | 0.851 | D | 0.549 | neutral | None | None | None | None | N |
K/C | 0.5028 | ambiguous | 0.5515 | ambiguous | -0.438 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/D | 0.374 | ambiguous | 0.4305 | ambiguous | 0.266 | Stabilizing | 0.976 | D | 0.547 | neutral | None | None | None | None | N |
K/E | 0.0879 | likely_benign | 0.0994 | benign | 0.318 | Stabilizing | 0.896 | D | 0.548 | neutral | N | 0.447858247 | None | None | N |
K/F | 0.5355 | ambiguous | 0.5976 | pathogenic | -0.103 | Destabilizing | 0.988 | D | 0.665 | neutral | None | None | None | None | N |
K/G | 0.3001 | likely_benign | 0.3509 | ambiguous | -0.324 | Destabilizing | 0.919 | D | 0.512 | neutral | None | None | None | None | N |
K/H | 0.196 | likely_benign | 0.2268 | benign | -0.482 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
K/I | 0.1966 | likely_benign | 0.2302 | benign | 0.519 | Stabilizing | 0.968 | D | 0.659 | neutral | N | 0.439724488 | None | None | N |
K/L | 0.2082 | likely_benign | 0.2448 | benign | 0.519 | Stabilizing | 0.851 | D | 0.516 | neutral | None | None | None | None | N |
K/M | 0.1351 | likely_benign | 0.1468 | benign | 0.123 | Stabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | N |
K/N | 0.2026 | likely_benign | 0.2309 | benign | -0.025 | Destabilizing | 0.968 | D | 0.525 | neutral | N | 0.439984316 | None | None | N |
K/P | 0.8818 | likely_pathogenic | 0.9118 | pathogenic | 0.351 | Stabilizing | 0.988 | D | 0.591 | neutral | None | None | None | None | N |
K/Q | 0.0837 | likely_benign | 0.0898 | benign | -0.101 | Destabilizing | 0.968 | D | 0.567 | neutral | N | 0.432651806 | None | None | N |
K/R | 0.0709 | likely_benign | 0.0754 | benign | -0.104 | Destabilizing | 0.026 | N | 0.258 | neutral | N | 0.400976505 | None | None | N |
K/S | 0.2039 | likely_benign | 0.236 | benign | -0.573 | Destabilizing | 0.851 | D | 0.531 | neutral | None | None | None | None | N |
K/T | 0.0891 | likely_benign | 0.0954 | benign | -0.347 | Destabilizing | 0.211 | N | 0.323 | neutral | N | 0.429341473 | None | None | N |
K/V | 0.1637 | likely_benign | 0.1915 | benign | 0.351 | Stabilizing | 0.952 | D | 0.515 | neutral | None | None | None | None | N |
K/W | 0.5962 | likely_pathogenic | 0.679 | pathogenic | -0.098 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/Y | 0.4167 | ambiguous | 0.4697 | ambiguous | 0.246 | Stabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.