Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5268 | 16027;16028;16029 | chr2:178733491;178733490;178733489 | chr2:179598218;179598217;179598216 |
N2AB | 4951 | 15076;15077;15078 | chr2:178733491;178733490;178733489 | chr2:179598218;179598217;179598216 |
N2A | 4024 | 12295;12296;12297 | chr2:178733491;178733490;178733489 | chr2:179598218;179598217;179598216 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.961 | N | 0.472 | 0.211 | 0.49530441419 | gnomAD-4.0.0 | 3.42576E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60234E-06 | 0 | 1.65959E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1536 | likely_benign | 0.1563 | benign | -0.077 | Destabilizing | 0.248 | N | 0.243 | neutral | N | 0.50471455 | None | None | I |
E/C | 0.8752 | likely_pathogenic | 0.8752 | pathogenic | -0.309 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | I |
E/D | 0.1127 | likely_benign | 0.1178 | benign | -0.297 | Destabilizing | 0.98 | D | 0.491 | neutral | N | 0.51008613 | None | None | I |
E/F | 0.7893 | likely_pathogenic | 0.781 | pathogenic | -0.04 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | I |
E/G | 0.1494 | likely_benign | 0.1436 | benign | -0.211 | Destabilizing | 0.961 | D | 0.508 | neutral | D | 0.621783356 | None | None | I |
E/H | 0.4522 | ambiguous | 0.4477 | ambiguous | 0.574 | Stabilizing | 0.999 | D | 0.449 | neutral | None | None | None | None | I |
E/I | 0.4643 | ambiguous | 0.4711 | ambiguous | 0.225 | Stabilizing | 0.996 | D | 0.591 | neutral | None | None | None | None | I |
E/K | 0.1453 | likely_benign | 0.1314 | benign | 0.319 | Stabilizing | 0.925 | D | 0.528 | neutral | N | 0.49417956 | None | None | I |
E/L | 0.4507 | ambiguous | 0.4685 | ambiguous | 0.225 | Stabilizing | 0.97 | D | 0.511 | neutral | None | None | None | None | I |
E/M | 0.5342 | ambiguous | 0.5456 | ambiguous | -0.059 | Destabilizing | 1.0 | D | 0.568 | neutral | None | None | None | None | I |
E/N | 0.2171 | likely_benign | 0.2154 | benign | 0.042 | Stabilizing | 0.996 | D | 0.434 | neutral | None | None | None | None | I |
E/P | 0.4203 | ambiguous | 0.4058 | ambiguous | 0.143 | Stabilizing | 0.092 | N | 0.229 | neutral | None | None | None | None | I |
E/Q | 0.1346 | likely_benign | 0.1362 | benign | 0.063 | Stabilizing | 0.961 | D | 0.472 | neutral | N | 0.505913922 | None | None | I |
E/R | 0.2659 | likely_benign | 0.2415 | benign | 0.618 | Stabilizing | 0.191 | N | 0.215 | neutral | None | None | None | None | I |
E/S | 0.1745 | likely_benign | 0.1753 | benign | -0.106 | Destabilizing | 0.942 | D | 0.477 | neutral | None | None | None | None | I |
E/T | 0.2275 | likely_benign | 0.2319 | benign | 0.011 | Stabilizing | 0.97 | D | 0.509 | neutral | None | None | None | None | I |
E/V | 0.2647 | likely_benign | 0.2729 | benign | 0.143 | Stabilizing | 0.961 | D | 0.5 | neutral | N | 0.510515378 | None | None | I |
E/W | 0.9207 | likely_pathogenic | 0.9151 | pathogenic | 0.034 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
E/Y | 0.6799 | likely_pathogenic | 0.6655 | pathogenic | 0.186 | Stabilizing | 0.999 | D | 0.572 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.