Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5269 | 16030;16031;16032 | chr2:178733488;178733487;178733486 | chr2:179598215;179598214;179598213 |
N2AB | 4952 | 15079;15080;15081 | chr2:178733488;178733487;178733486 | chr2:179598215;179598214;179598213 |
N2A | 4025 | 12298;12299;12300 | chr2:178733488;178733487;178733486 | chr2:179598215;179598214;179598213 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.927 | N | 0.418 | 0.289 | 0.449379577644 | gnomAD-4.0.0 | 7.53545E-06 | None | None | None | None | I | None | 0 | 2.24155E-05 | None | 0 | 0 | None | 0 | 0 | 9.00494E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1763 | likely_benign | 0.1339 | benign | -0.644 | Destabilizing | 0.329 | N | 0.306 | neutral | None | None | None | None | I |
L/C | 0.4721 | ambiguous | 0.3696 | ambiguous | -0.555 | Destabilizing | 0.017 | N | 0.263 | neutral | None | None | None | None | I |
L/D | 0.3964 | ambiguous | 0.2961 | benign | -0.28 | Destabilizing | 0.007 | N | 0.27 | neutral | None | None | None | None | I |
L/E | 0.2193 | likely_benign | 0.168 | benign | -0.373 | Destabilizing | 0.543 | D | 0.443 | neutral | None | None | None | None | I |
L/F | 0.1328 | likely_benign | 0.1006 | benign | -0.658 | Destabilizing | 0.017 | N | 0.216 | neutral | None | None | None | None | I |
L/G | 0.3496 | ambiguous | 0.2734 | benign | -0.813 | Destabilizing | 0.704 | D | 0.42 | neutral | None | None | None | None | I |
L/H | 0.1696 | likely_benign | 0.1199 | benign | -0.159 | Destabilizing | 0.995 | D | 0.355 | neutral | None | None | None | None | I |
L/I | 0.0945 | likely_benign | 0.0788 | benign | -0.32 | Destabilizing | 0.329 | N | 0.267 | neutral | None | None | None | None | I |
L/K | 0.1841 | likely_benign | 0.1327 | benign | -0.382 | Destabilizing | 0.704 | D | 0.435 | neutral | None | None | None | None | I |
L/M | 0.0991 | likely_benign | 0.0898 | benign | -0.388 | Destabilizing | 0.139 | N | 0.235 | neutral | N | 0.439411894 | None | None | I |
L/N | 0.1966 | likely_benign | 0.1428 | benign | -0.134 | Destabilizing | 0.893 | D | 0.448 | neutral | None | None | None | None | I |
L/P | 0.1309 | likely_benign | 0.1 | benign | -0.395 | Destabilizing | 0.927 | D | 0.418 | neutral | N | 0.34509106 | None | None | I |
L/Q | 0.1143 | likely_benign | 0.089 | benign | -0.371 | Destabilizing | 0.927 | D | 0.378 | neutral | N | 0.447881192 | None | None | I |
L/R | 0.1519 | likely_benign | 0.114 | benign | 0.164 | Stabilizing | 0.927 | D | 0.386 | neutral | N | 0.448229931 | None | None | I |
L/S | 0.1964 | likely_benign | 0.1361 | benign | -0.558 | Destabilizing | 0.037 | N | 0.193 | neutral | None | None | None | None | I |
L/T | 0.1637 | likely_benign | 0.1202 | benign | -0.544 | Destabilizing | 0.543 | D | 0.311 | neutral | None | None | None | None | I |
L/V | 0.0894 | likely_benign | 0.0779 | benign | -0.395 | Destabilizing | 0.006 | N | 0.173 | neutral | N | 0.417533058 | None | None | I |
L/W | 0.2158 | likely_benign | 0.1532 | benign | -0.683 | Destabilizing | 0.995 | D | 0.338 | neutral | None | None | None | None | I |
L/Y | 0.2812 | likely_benign | 0.2004 | benign | -0.43 | Destabilizing | 0.807 | D | 0.36 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.