Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5275 | 16048;16049;16050 | chr2:178733470;178733469;178733468 | chr2:179598197;179598196;179598195 |
N2AB | 4958 | 15097;15098;15099 | chr2:178733470;178733469;178733468 | chr2:179598197;179598196;179598195 |
N2A | 4031 | 12316;12317;12318 | chr2:178733470;178733469;178733468 | chr2:179598197;179598196;179598195 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 1.0 | D | 0.898 | 0.807 | 0.709239017261 | gnomAD-4.0.0 | 6.84271E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99535E-07 | 0 | 0 |
G/R | rs1019067272 | None | 1.0 | D | 0.911 | 0.79 | 0.713845456477 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/R | rs1019067272 | None | 1.0 | D | 0.911 | 0.79 | 0.713845456477 | gnomAD-4.0.0 | 3.09865E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.2383E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4373 | ambiguous | 0.4093 | ambiguous | -0.289 | Destabilizing | 1.0 | D | 0.8 | deleterious | D | 0.794112397 | None | None | I |
G/C | 0.7739 | likely_pathogenic | 0.7249 | pathogenic | -0.848 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | I |
G/D | 0.7916 | likely_pathogenic | 0.6752 | pathogenic | -0.635 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | I |
G/E | 0.815 | likely_pathogenic | 0.6876 | pathogenic | -0.809 | Destabilizing | 1.0 | D | 0.898 | deleterious | D | 0.731395526 | None | None | I |
G/F | 0.9471 | likely_pathogenic | 0.9162 | pathogenic | -1.106 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | I |
G/H | 0.872 | likely_pathogenic | 0.8 | pathogenic | -0.516 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
G/I | 0.9497 | likely_pathogenic | 0.9155 | pathogenic | -0.493 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | I |
G/K | 0.8441 | likely_pathogenic | 0.7293 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | I |
G/L | 0.8681 | likely_pathogenic | 0.8232 | pathogenic | -0.493 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
G/M | 0.8932 | likely_pathogenic | 0.8447 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
G/N | 0.7012 | likely_pathogenic | 0.6106 | pathogenic | -0.389 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | I |
G/P | 0.9953 | likely_pathogenic | 0.9935 | pathogenic | -0.394 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | I |
G/Q | 0.7563 | likely_pathogenic | 0.6514 | pathogenic | -0.715 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | I |
G/R | 0.7081 | likely_pathogenic | 0.5859 | pathogenic | -0.247 | Destabilizing | 1.0 | D | 0.911 | deleterious | D | 0.671290786 | None | None | I |
G/S | 0.2848 | likely_benign | 0.2468 | benign | -0.509 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
G/T | 0.6665 | likely_pathogenic | 0.5558 | ambiguous | -0.622 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | I |
G/V | 0.8809 | likely_pathogenic | 0.8278 | pathogenic | -0.394 | Destabilizing | 1.0 | D | 0.872 | deleterious | D | 0.826823217 | None | None | I |
G/W | 0.8934 | likely_pathogenic | 0.8367 | pathogenic | -1.229 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | I |
G/Y | 0.9188 | likely_pathogenic | 0.8809 | pathogenic | -0.882 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.