Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5276 | 16051;16052;16053 | chr2:178733467;178733466;178733465 | chr2:179598194;179598193;179598192 |
N2AB | 4959 | 15100;15101;15102 | chr2:178733467;178733466;178733465 | chr2:179598194;179598193;179598192 |
N2A | 4032 | 12319;12320;12321 | chr2:178733467;178733466;178733465 | chr2:179598194;179598193;179598192 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs769246267 | 0.592 | 0.993 | N | 0.719 | 0.226 | 0.158396225186 | gnomAD-2.1.1 | 7.15E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.57E-05 | 0 |
D/N | rs769246267 | 0.592 | 0.993 | N | 0.719 | 0.226 | 0.158396225186 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/N | rs769246267 | 0.592 | 0.993 | N | 0.719 | 0.226 | 0.158396225186 | gnomAD-4.0.0 | 2.47888E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39055E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4855 | ambiguous | 0.4721 | ambiguous | -0.227 | Destabilizing | 0.977 | D | 0.635 | neutral | N | 0.490828993 | None | None | I |
D/C | 0.9115 | likely_pathogenic | 0.9113 | pathogenic | 0.255 | Stabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | I |
D/E | 0.3012 | likely_benign | 0.3108 | benign | -0.274 | Destabilizing | 0.117 | N | 0.302 | neutral | N | 0.435857425 | None | None | I |
D/F | 0.7685 | likely_pathogenic | 0.759 | pathogenic | -0.351 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
D/G | 0.6861 | likely_pathogenic | 0.6769 | pathogenic | -0.399 | Destabilizing | 0.989 | D | 0.682 | prob.neutral | N | 0.440529099 | None | None | I |
D/H | 0.6405 | likely_pathogenic | 0.5934 | pathogenic | -0.268 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | N | 0.504400287 | None | None | I |
D/I | 0.621 | likely_pathogenic | 0.624 | pathogenic | 0.172 | Stabilizing | 0.998 | D | 0.79 | deleterious | None | None | None | None | I |
D/K | 0.7814 | likely_pathogenic | 0.7352 | pathogenic | 0.486 | Stabilizing | 0.99 | D | 0.714 | prob.delet. | None | None | None | None | I |
D/L | 0.6494 | likely_pathogenic | 0.642 | pathogenic | 0.172 | Stabilizing | 0.995 | D | 0.759 | deleterious | None | None | None | None | I |
D/M | 0.7884 | likely_pathogenic | 0.7817 | pathogenic | 0.398 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
D/N | 0.1947 | likely_benign | 0.1837 | benign | 0.266 | Stabilizing | 0.993 | D | 0.719 | prob.delet. | N | 0.455444452 | None | None | I |
D/P | 0.9851 | likely_pathogenic | 0.9858 | pathogenic | 0.061 | Stabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | I |
D/Q | 0.6303 | likely_pathogenic | 0.598 | pathogenic | 0.272 | Stabilizing | 0.99 | D | 0.748 | deleterious | None | None | None | None | I |
D/R | 0.8163 | likely_pathogenic | 0.7898 | pathogenic | 0.523 | Stabilizing | 0.995 | D | 0.746 | deleterious | None | None | None | None | I |
D/S | 0.3167 | likely_benign | 0.3006 | benign | 0.168 | Stabilizing | 0.983 | D | 0.642 | neutral | None | None | None | None | I |
D/T | 0.5994 | likely_pathogenic | 0.5801 | pathogenic | 0.3 | Stabilizing | 0.995 | D | 0.711 | prob.delet. | None | None | None | None | I |
D/V | 0.4702 | ambiguous | 0.4636 | ambiguous | 0.061 | Stabilizing | 0.997 | D | 0.761 | deleterious | D | 0.599931545 | None | None | I |
D/W | 0.9687 | likely_pathogenic | 0.9647 | pathogenic | -0.273 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
D/Y | 0.4594 | ambiguous | 0.4179 | ambiguous | -0.119 | Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.524483792 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.