Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5277 | 16054;16055;16056 | chr2:178733464;178733463;178733462 | chr2:179598191;179598190;179598189 |
N2AB | 4960 | 15103;15104;15105 | chr2:178733464;178733463;178733462 | chr2:179598191;179598190;179598189 |
N2A | 4033 | 12322;12323;12324 | chr2:178733464;178733463;178733462 | chr2:179598191;179598190;179598189 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.956 | N | 0.407 | 0.251 | 0.276898752692 | gnomAD-4.0.0 | 1.20036E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31255E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.111 | likely_benign | 0.1159 | benign | -0.631 | Destabilizing | 0.9 | D | 0.412 | neutral | N | 0.453646469 | None | None | N |
P/C | 0.7499 | likely_pathogenic | 0.7606 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
P/D | 0.8124 | likely_pathogenic | 0.7474 | pathogenic | -0.215 | Destabilizing | 0.983 | D | 0.402 | neutral | None | None | None | None | N |
P/E | 0.6588 | likely_pathogenic | 0.5867 | pathogenic | -0.317 | Destabilizing | 0.983 | D | 0.417 | neutral | None | None | None | None | N |
P/F | 0.6736 | likely_pathogenic | 0.6412 | pathogenic | -0.773 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
P/G | 0.5446 | ambiguous | 0.533 | ambiguous | -0.802 | Destabilizing | 0.983 | D | 0.453 | neutral | None | None | None | None | N |
P/H | 0.4359 | ambiguous | 0.3846 | ambiguous | -0.329 | Destabilizing | 1.0 | D | 0.576 | neutral | N | 0.478903333 | None | None | N |
P/I | 0.4097 | ambiguous | 0.4564 | ambiguous | -0.325 | Destabilizing | 0.998 | D | 0.652 | neutral | None | None | None | None | N |
P/K | 0.728 | likely_pathogenic | 0.6525 | pathogenic | -0.42 | Destabilizing | 0.983 | D | 0.411 | neutral | None | None | None | None | N |
P/L | 0.2047 | likely_benign | 0.2158 | benign | -0.325 | Destabilizing | 0.997 | D | 0.593 | neutral | N | 0.488990887 | None | None | N |
P/M | 0.4024 | ambiguous | 0.4288 | ambiguous | -0.265 | Destabilizing | 1.0 | D | 0.574 | neutral | None | None | None | None | N |
P/N | 0.5548 | ambiguous | 0.5405 | ambiguous | -0.132 | Destabilizing | 0.995 | D | 0.499 | neutral | None | None | None | None | N |
P/Q | 0.3765 | ambiguous | 0.3596 | ambiguous | -0.394 | Destabilizing | 0.998 | D | 0.467 | neutral | None | None | None | None | N |
P/R | 0.5259 | ambiguous | 0.4448 | ambiguous | 0.104 | Stabilizing | 0.997 | D | 0.573 | neutral | N | 0.434395091 | None | None | N |
P/S | 0.2113 | likely_benign | 0.1939 | benign | -0.587 | Destabilizing | 0.418 | N | 0.306 | neutral | N | 0.440658981 | None | None | N |
P/T | 0.1484 | likely_benign | 0.1424 | benign | -0.582 | Destabilizing | 0.956 | D | 0.407 | neutral | N | 0.440125327 | None | None | N |
P/V | 0.2831 | likely_benign | 0.3162 | benign | -0.391 | Destabilizing | 0.998 | D | 0.497 | neutral | None | None | None | None | N |
P/W | 0.8768 | likely_pathogenic | 0.8457 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
P/Y | 0.727 | likely_pathogenic | 0.6572 | pathogenic | -0.523 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.