Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5280 | 16063;16064;16065 | chr2:178733455;178733454;178733453 | chr2:179598182;179598181;179598180 |
N2AB | 4963 | 15112;15113;15114 | chr2:178733455;178733454;178733453 | chr2:179598182;179598181;179598180 |
N2A | 4036 | 12331;12332;12333 | chr2:178733455;178733454;178733453 | chr2:179598182;179598181;179598180 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs879207679 | None | 0.996 | D | 0.693 | 0.522 | 0.675152924593 | gnomAD-4.0.0 | 1.59133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85838E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.841 | likely_pathogenic | 0.8505 | pathogenic | -1.978 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | N |
L/C | 0.9078 | likely_pathogenic | 0.9104 | pathogenic | -1.267 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
L/D | 0.9983 | likely_pathogenic | 0.9982 | pathogenic | -2.796 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/E | 0.9862 | likely_pathogenic | 0.9851 | pathogenic | -2.505 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/F | 0.2807 | likely_benign | 0.2789 | benign | -1.284 | Destabilizing | 0.702 | D | 0.479 | neutral | None | None | None | None | N |
L/G | 0.9836 | likely_pathogenic | 0.9813 | pathogenic | -2.497 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/H | 0.9581 | likely_pathogenic | 0.9557 | pathogenic | -2.458 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/I | 0.1358 | likely_benign | 0.1419 | benign | -0.416 | Destabilizing | 0.997 | D | 0.675 | neutral | None | None | None | None | N |
L/K | 0.9784 | likely_pathogenic | 0.9741 | pathogenic | -1.518 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/M | 0.1788 | likely_benign | 0.1939 | benign | -0.673 | Destabilizing | 1.0 | D | 0.765 | deleterious | D | 0.691089312 | None | None | N |
L/N | 0.9912 | likely_pathogenic | 0.9899 | pathogenic | -2.235 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/P | 0.9924 | likely_pathogenic | 0.9935 | pathogenic | -0.929 | Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.842288788 | None | None | N |
L/Q | 0.9424 | likely_pathogenic | 0.9394 | pathogenic | -1.834 | Destabilizing | 1.0 | D | 0.86 | deleterious | D | 0.842288788 | None | None | N |
L/R | 0.9584 | likely_pathogenic | 0.955 | pathogenic | -1.872 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.842288788 | None | None | N |
L/S | 0.9698 | likely_pathogenic | 0.97 | pathogenic | -2.622 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/T | 0.8976 | likely_pathogenic | 0.9014 | pathogenic | -2.174 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
L/V | 0.1702 | likely_benign | 0.1916 | benign | -0.929 | Destabilizing | 0.996 | D | 0.693 | prob.neutral | D | 0.707335855 | None | None | N |
L/W | 0.7748 | likely_pathogenic | 0.7647 | pathogenic | -1.614 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
L/Y | 0.8895 | likely_pathogenic | 0.8735 | pathogenic | -1.388 | Destabilizing | 0.998 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.