Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5283 | 16072;16073;16074 | chr2:178733446;178733445;178733444 | chr2:179598173;179598172;179598171 |
N2AB | 4966 | 15121;15122;15123 | chr2:178733446;178733445;178733444 | chr2:179598173;179598172;179598171 |
N2A | 4039 | 12340;12341;12342 | chr2:178733446;178733445;178733444 | chr2:179598173;179598172;179598171 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | None | None | 0.188 | N | 0.601 | 0.204 | 0.669087604336 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0768 | likely_benign | 0.0948 | benign | -0.984 | Destabilizing | 0.002 | N | 0.264 | neutral | N | 0.514201528 | None | None | N |
T/C | 0.3816 | ambiguous | 0.4521 | ambiguous | -0.806 | Destabilizing | 0.935 | D | 0.563 | neutral | None | None | None | None | N |
T/D | 0.4671 | ambiguous | 0.5869 | pathogenic | -1.167 | Destabilizing | 0.555 | D | 0.603 | neutral | None | None | None | None | N |
T/E | 0.2733 | likely_benign | 0.3559 | ambiguous | -1.045 | Destabilizing | 0.149 | N | 0.579 | neutral | None | None | None | None | N |
T/F | 0.2257 | likely_benign | 0.3064 | benign | -0.659 | Destabilizing | 0.38 | N | 0.598 | neutral | None | None | None | None | N |
T/G | 0.2924 | likely_benign | 0.3966 | ambiguous | -1.354 | Destabilizing | 0.149 | N | 0.596 | neutral | None | None | None | None | N |
T/H | 0.2183 | likely_benign | 0.2691 | benign | -1.579 | Destabilizing | 0.935 | D | 0.583 | neutral | None | None | None | None | N |
T/I | 0.1119 | likely_benign | 0.1468 | benign | -0.046 | Destabilizing | 0.004 | N | 0.389 | neutral | N | 0.51848684 | None | None | N |
T/K | 0.129 | likely_benign | 0.1549 | benign | -0.865 | Destabilizing | 0.002 | N | 0.395 | neutral | N | 0.464576953 | None | None | N |
T/L | 0.0831 | likely_benign | 0.1102 | benign | -0.046 | Destabilizing | 0.012 | N | 0.527 | neutral | None | None | None | None | N |
T/M | 0.0761 | likely_benign | 0.0913 | benign | -0.018 | Destabilizing | 0.012 | N | 0.507 | neutral | None | None | None | None | N |
T/N | 0.1523 | likely_benign | 0.1839 | benign | -1.232 | Destabilizing | 0.555 | D | 0.577 | neutral | None | None | None | None | N |
T/P | 0.257 | likely_benign | 0.366 | ambiguous | -0.326 | Destabilizing | 0.484 | N | 0.603 | neutral | N | 0.516521741 | None | None | N |
T/Q | 0.1785 | likely_benign | 0.2187 | benign | -1.161 | Destabilizing | 0.38 | N | 0.597 | neutral | None | None | None | None | N |
T/R | 0.1023 | likely_benign | 0.1264 | benign | -0.877 | Destabilizing | 0.188 | N | 0.601 | neutral | N | 0.509862529 | None | None | N |
T/S | 0.1251 | likely_benign | 0.1491 | benign | -1.43 | Destabilizing | 0.062 | N | 0.506 | neutral | N | 0.514065105 | None | None | N |
T/V | 0.0925 | likely_benign | 0.1143 | benign | -0.326 | Destabilizing | 0.035 | N | 0.507 | neutral | None | None | None | None | N |
T/W | 0.5603 | ambiguous | 0.6862 | pathogenic | -0.747 | Destabilizing | 0.935 | D | 0.613 | neutral | None | None | None | None | N |
T/Y | 0.2838 | likely_benign | 0.3493 | ambiguous | -0.433 | Destabilizing | 0.555 | D | 0.61 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.