Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5295 | 16108;16109;16110 | chr2:178733410;178733409;178733408 | chr2:179598137;179598136;179598135 |
N2AB | 4978 | 15157;15158;15159 | chr2:178733410;178733409;178733408 | chr2:179598137;179598136;179598135 |
N2A | 4051 | 12376;12377;12378 | chr2:178733410;178733409;178733408 | chr2:179598137;179598136;179598135 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs753916999 | -1.09 | 0.978 | D | 0.609 | 0.427 | 0.47737504017 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs753916999 | -1.09 | 0.978 | D | 0.609 | 0.427 | 0.47737504017 | gnomAD-4.0.0 | 1.59125E-06 | None | None | None | None | N | None | 0 | 2.28645E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6394 | likely_pathogenic | 0.6917 | pathogenic | -2.578 | Highly Destabilizing | 0.228 | N | 0.565 | neutral | None | None | None | None | N |
Y/C | 0.1498 | likely_benign | 0.1945 | benign | -1.042 | Destabilizing | 0.978 | D | 0.609 | neutral | D | 0.597200376 | None | None | N |
Y/D | 0.5519 | ambiguous | 0.6098 | pathogenic | -1.294 | Destabilizing | 0.794 | D | 0.639 | neutral | D | 0.556403774 | None | None | N |
Y/E | 0.6955 | likely_pathogenic | 0.7488 | pathogenic | -1.208 | Destabilizing | 0.418 | N | 0.602 | neutral | None | None | None | None | N |
Y/F | 0.062 | likely_benign | 0.0657 | benign | -1.187 | Destabilizing | None | N | 0.194 | neutral | N | 0.388189647 | None | None | N |
Y/G | 0.6022 | likely_pathogenic | 0.6517 | pathogenic | -2.911 | Highly Destabilizing | 0.593 | D | 0.626 | neutral | None | None | None | None | N |
Y/H | 0.1607 | likely_benign | 0.1908 | benign | -1.323 | Destabilizing | 0.794 | D | 0.563 | neutral | N | 0.490003076 | None | None | N |
Y/I | 0.411 | ambiguous | 0.4215 | ambiguous | -1.551 | Destabilizing | 0.264 | N | 0.554 | neutral | None | None | None | None | N |
Y/K | 0.5563 | ambiguous | 0.5655 | pathogenic | -1.298 | Destabilizing | 0.264 | N | 0.612 | neutral | None | None | None | None | N |
Y/L | 0.326 | likely_benign | 0.3351 | benign | -1.551 | Destabilizing | 0.129 | N | 0.489 | neutral | None | None | None | None | N |
Y/M | 0.4334 | ambiguous | 0.4658 | ambiguous | -1.085 | Destabilizing | 0.836 | D | 0.585 | neutral | None | None | None | None | N |
Y/N | 0.2275 | likely_benign | 0.2462 | benign | -1.552 | Destabilizing | 0.655 | D | 0.622 | neutral | N | 0.501927723 | None | None | N |
Y/P | 0.9897 | likely_pathogenic | 0.9929 | pathogenic | -1.891 | Destabilizing | 0.94 | D | 0.64 | neutral | None | None | None | None | N |
Y/Q | 0.463 | ambiguous | 0.5156 | ambiguous | -1.521 | Destabilizing | 0.716 | D | 0.599 | neutral | None | None | None | None | N |
Y/R | 0.4287 | ambiguous | 0.4384 | ambiguous | -0.79 | Destabilizing | 0.002 | N | 0.382 | neutral | None | None | None | None | N |
Y/S | 0.3134 | likely_benign | 0.3465 | ambiguous | -2.105 | Highly Destabilizing | 0.351 | N | 0.594 | neutral | N | 0.453657843 | None | None | N |
Y/T | 0.5101 | ambiguous | 0.5491 | ambiguous | -1.922 | Destabilizing | 0.593 | D | 0.585 | neutral | None | None | None | None | N |
Y/V | 0.3591 | ambiguous | 0.373 | ambiguous | -1.891 | Destabilizing | 0.264 | N | 0.559 | neutral | None | None | None | None | N |
Y/W | 0.3675 | ambiguous | 0.4131 | ambiguous | -0.748 | Destabilizing | 0.94 | D | 0.568 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.