Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5302 | 16129;16130;16131 | chr2:178733389;178733388;178733387 | chr2:179598116;179598115;179598114 |
N2AB | 4985 | 15178;15179;15180 | chr2:178733389;178733388;178733387 | chr2:179598116;179598115;179598114 |
N2A | 4058 | 12397;12398;12399 | chr2:178733389;178733388;178733387 | chr2:179598116;179598115;179598114 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.213 | N | 0.417 | 0.288 | 0.625243557465 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | rs1410470675 | None | 0.001 | N | 0.166 | 0.045 | 0.28058544554 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs1410470675 | None | 0.001 | N | 0.166 | 0.045 | 0.28058544554 | gnomAD-4.0.0 | 2.5624E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78618E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1031 | likely_benign | 0.1218 | benign | -0.505 | Destabilizing | 0.001 | N | 0.116 | neutral | N | 0.45718603 | None | None | N |
V/C | 0.6936 | likely_pathogenic | 0.7597 | pathogenic | -0.895 | Destabilizing | 0.951 | D | 0.343 | neutral | None | None | None | None | N |
V/D | 0.2731 | likely_benign | 0.3239 | benign | -0.366 | Destabilizing | 0.213 | N | 0.417 | neutral | N | 0.489227862 | None | None | N |
V/E | 0.2295 | likely_benign | 0.2627 | benign | -0.437 | Destabilizing | 0.01 | N | 0.285 | neutral | None | None | None | None | N |
V/F | 0.1374 | likely_benign | 0.1628 | benign | -0.63 | Destabilizing | 0.655 | D | 0.359 | neutral | N | 0.510702151 | None | None | N |
V/G | 0.1571 | likely_benign | 0.1832 | benign | -0.626 | Destabilizing | 0.213 | N | 0.395 | neutral | N | 0.494365855 | None | None | N |
V/H | 0.4164 | ambiguous | 0.4661 | ambiguous | -0.002 | Destabilizing | 0.983 | D | 0.368 | neutral | None | None | None | None | N |
V/I | 0.0794 | likely_benign | 0.0893 | benign | -0.307 | Destabilizing | 0.001 | N | 0.166 | neutral | N | 0.474684616 | None | None | N |
V/K | 0.2716 | likely_benign | 0.2883 | benign | -0.509 | Destabilizing | 0.418 | N | 0.389 | neutral | None | None | None | None | N |
V/L | 0.1312 | likely_benign | 0.1623 | benign | -0.307 | Destabilizing | 0.037 | N | 0.229 | neutral | N | 0.499379932 | None | None | N |
V/M | 0.1216 | likely_benign | 0.1469 | benign | -0.687 | Destabilizing | 0.716 | D | 0.309 | neutral | None | None | None | None | N |
V/N | 0.204 | likely_benign | 0.253 | benign | -0.449 | Destabilizing | 0.716 | D | 0.415 | neutral | None | None | None | None | N |
V/P | 0.269 | likely_benign | 0.3332 | benign | -0.344 | Destabilizing | 0.002 | N | 0.293 | neutral | None | None | None | None | N |
V/Q | 0.2428 | likely_benign | 0.261 | benign | -0.594 | Destabilizing | 0.716 | D | 0.387 | neutral | None | None | None | None | N |
V/R | 0.2461 | likely_benign | 0.2483 | benign | -0.06 | Destabilizing | 0.716 | D | 0.411 | neutral | None | None | None | None | N |
V/S | 0.138 | likely_benign | 0.1672 | benign | -0.795 | Destabilizing | 0.129 | N | 0.388 | neutral | None | None | None | None | N |
V/T | 0.1255 | likely_benign | 0.1398 | benign | -0.762 | Destabilizing | 0.004 | N | 0.135 | neutral | None | None | None | None | N |
V/W | 0.6792 | likely_pathogenic | 0.7571 | pathogenic | -0.702 | Destabilizing | 0.983 | D | 0.409 | neutral | None | None | None | None | N |
V/Y | 0.4147 | ambiguous | 0.4774 | ambiguous | -0.434 | Destabilizing | 0.836 | D | 0.343 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.