Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5311 | 16156;16157;16158 | chr2:178733362;178733361;178733360 | chr2:179598089;179598088;179598087 |
N2AB | 4994 | 15205;15206;15207 | chr2:178733362;178733361;178733360 | chr2:179598089;179598088;179598087 |
N2A | 4067 | 12424;12425;12426 | chr2:178733362;178733361;178733360 | chr2:179598089;179598088;179598087 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs768239529 | -1.224 | 0.03 | D | 0.265 | 0.174 | 0.319114376414 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
F/L | rs768239529 | -1.224 | 0.03 | D | 0.265 | 0.174 | 0.319114376414 | gnomAD-4.0.0 | 3.18258E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71647E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9487 | likely_pathogenic | 0.944 | pathogenic | -2.183 | Highly Destabilizing | 0.927 | D | 0.635 | neutral | None | None | None | None | N |
F/C | 0.798 | likely_pathogenic | 0.8035 | pathogenic | -1.279 | Destabilizing | 0.999 | D | 0.666 | neutral | D | 0.613116445 | None | None | N |
F/D | 0.9846 | likely_pathogenic | 0.9838 | pathogenic | -0.903 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
F/E | 0.9782 | likely_pathogenic | 0.9776 | pathogenic | -0.796 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
F/G | 0.9733 | likely_pathogenic | 0.9728 | pathogenic | -2.541 | Highly Destabilizing | 0.995 | D | 0.695 | prob.neutral | None | None | None | None | N |
F/H | 0.8844 | likely_pathogenic | 0.8873 | pathogenic | -0.81 | Destabilizing | 1.0 | D | 0.587 | neutral | None | None | None | None | N |
F/I | 0.6061 | likely_pathogenic | 0.5797 | pathogenic | -1.099 | Destabilizing | 0.828 | D | 0.546 | neutral | D | 0.554119919 | None | None | N |
F/K | 0.9741 | likely_pathogenic | 0.9756 | pathogenic | -1.386 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
F/L | 0.9391 | likely_pathogenic | 0.9309 | pathogenic | -1.099 | Destabilizing | 0.03 | N | 0.265 | neutral | D | 0.531661587 | None | None | N |
F/M | 0.7717 | likely_pathogenic | 0.759 | pathogenic | -0.85 | Destabilizing | 0.991 | D | 0.613 | neutral | None | None | None | None | N |
F/N | 0.9454 | likely_pathogenic | 0.9443 | pathogenic | -1.505 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
F/P | 0.9983 | likely_pathogenic | 0.9982 | pathogenic | -1.455 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
F/Q | 0.9471 | likely_pathogenic | 0.9473 | pathogenic | -1.516 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
F/R | 0.942 | likely_pathogenic | 0.946 | pathogenic | -0.785 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
F/S | 0.8962 | likely_pathogenic | 0.8964 | pathogenic | -2.318 | Highly Destabilizing | 0.979 | D | 0.689 | prob.neutral | N | 0.510105269 | None | None | N |
F/T | 0.9051 | likely_pathogenic | 0.9016 | pathogenic | -2.109 | Highly Destabilizing | 0.969 | D | 0.661 | neutral | None | None | None | None | N |
F/V | 0.6081 | likely_pathogenic | 0.5887 | pathogenic | -1.455 | Destabilizing | 0.238 | N | 0.349 | neutral | N | 0.501504195 | None | None | N |
F/W | 0.7114 | likely_pathogenic | 0.7253 | pathogenic | -0.275 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
F/Y | 0.3501 | ambiguous | 0.3591 | ambiguous | -0.532 | Destabilizing | 0.993 | D | 0.542 | neutral | N | 0.507037484 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.