Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5313 | 16162;16163;16164 | chr2:178733356;178733355;178733354 | chr2:179598083;179598082;179598081 |
N2AB | 4996 | 15211;15212;15213 | chr2:178733356;178733355;178733354 | chr2:179598083;179598082;179598081 |
N2A | 4069 | 12430;12431;12432 | chr2:178733356;178733355;178733354 | chr2:179598083;179598082;179598081 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.826 | N | 0.381 | 0.204 | 0.176091768786 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
N/Y | rs2080887582 | None | 0.996 | D | 0.327 | 0.495 | 0.356072328145 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.43E-05 | 0 | 0 | 0 | 0 |
N/Y | rs2080887582 | None | 0.996 | D | 0.327 | 0.495 | 0.356072328145 | gnomAD-4.0.0 | 2.56226E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.13844E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5624 | ambiguous | 0.5725 | pathogenic | -0.048 | Destabilizing | 0.939 | D | 0.379 | neutral | None | None | None | None | N |
N/C | 0.6767 | likely_pathogenic | 0.6737 | pathogenic | 0.097 | Stabilizing | 0.999 | D | 0.395 | neutral | None | None | None | None | N |
N/D | 0.1519 | likely_benign | 0.1656 | benign | 0.178 | Stabilizing | 0.015 | N | 0.153 | neutral | N | 0.440146002 | None | None | N |
N/E | 0.5145 | ambiguous | 0.5474 | ambiguous | 0.123 | Stabilizing | 0.17 | N | 0.184 | neutral | None | None | None | None | N |
N/F | 0.8604 | likely_pathogenic | 0.8641 | pathogenic | -0.662 | Destabilizing | 0.997 | D | 0.337 | neutral | None | None | None | None | N |
N/G | 0.3988 | ambiguous | 0.3856 | ambiguous | -0.143 | Destabilizing | 0.927 | D | 0.352 | neutral | None | None | None | None | N |
N/H | 0.205 | likely_benign | 0.2068 | benign | -0.13 | Destabilizing | 0.996 | D | 0.297 | neutral | D | 0.529216062 | None | None | N |
N/I | 0.7381 | likely_pathogenic | 0.7682 | pathogenic | 0.102 | Stabilizing | 0.996 | D | 0.341 | neutral | D | 0.571021809 | None | None | N |
N/K | 0.5018 | ambiguous | 0.5467 | ambiguous | 0.12 | Stabilizing | 0.92 | D | 0.319 | neutral | N | 0.444327508 | None | None | N |
N/L | 0.6589 | likely_pathogenic | 0.68 | pathogenic | 0.102 | Stabilizing | 0.991 | D | 0.345 | neutral | None | None | None | None | N |
N/M | 0.6545 | likely_pathogenic | 0.6791 | pathogenic | 0.046 | Stabilizing | 0.999 | D | 0.341 | neutral | None | None | None | None | N |
N/P | 0.94 | likely_pathogenic | 0.949 | pathogenic | 0.075 | Stabilizing | 0.997 | D | 0.352 | neutral | None | None | None | None | N |
N/Q | 0.4939 | ambiguous | 0.5137 | ambiguous | -0.256 | Destabilizing | 0.939 | D | 0.315 | neutral | None | None | None | None | N |
N/R | 0.5811 | likely_pathogenic | 0.6087 | pathogenic | 0.183 | Stabilizing | 0.982 | D | 0.283 | neutral | None | None | None | None | N |
N/S | 0.1747 | likely_benign | 0.179 | benign | -0.06 | Destabilizing | 0.826 | D | 0.381 | neutral | N | 0.460921661 | None | None | N |
N/T | 0.4266 | ambiguous | 0.4577 | ambiguous | None | Stabilizing | 0.959 | D | 0.308 | neutral | N | 0.502835634 | None | None | N |
N/V | 0.7322 | likely_pathogenic | 0.7535 | pathogenic | 0.075 | Stabilizing | 0.991 | D | 0.359 | neutral | None | None | None | None | N |
N/W | 0.9002 | likely_pathogenic | 0.9019 | pathogenic | -0.817 | Destabilizing | 0.999 | D | 0.503 | neutral | None | None | None | None | N |
N/Y | 0.3122 | likely_benign | 0.3217 | benign | -0.475 | Destabilizing | 0.996 | D | 0.327 | neutral | D | 0.53096329 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.