Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5316 | 16171;16172;16173 | chr2:178733347;178733346;178733345 | chr2:179598074;179598073;179598072 |
N2AB | 4999 | 15220;15221;15222 | chr2:178733347;178733346;178733345 | chr2:179598074;179598073;179598072 |
N2A | 4072 | 12439;12440;12441 | chr2:178733347;178733346;178733345 | chr2:179598074;179598073;179598072 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs879242937 | 0.903 | 0.996 | N | 0.647 | 0.311 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
A/V | rs879242937 | 0.903 | 0.996 | N | 0.647 | 0.311 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
A/V | rs879242937 | 0.903 | 0.996 | N | 0.647 | 0.311 | None | gnomAD-4.0.0 | 2.78862E-05 | None | None | None | None | N | None | 1.33476E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.47515E-05 | 0 | 4.80369E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6753 | likely_pathogenic | 0.6619 | pathogenic | -0.106 | Destabilizing | 0.844 | D | 0.515 | neutral | None | None | None | None | N |
A/D | 0.9826 | likely_pathogenic | 0.985 | pathogenic | -1.769 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.561059366 | None | None | N |
A/E | 0.962 | likely_pathogenic | 0.9662 | pathogenic | -1.44 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
A/F | 0.8057 | likely_pathogenic | 0.813 | pathogenic | 0.008 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
A/G | 0.3439 | ambiguous | 0.3481 | ambiguous | -0.941 | Destabilizing | 0.998 | D | 0.636 | neutral | N | 0.454508203 | None | None | N |
A/H | 0.9635 | likely_pathogenic | 0.9671 | pathogenic | -1.759 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/I | 0.6475 | likely_pathogenic | 0.6547 | pathogenic | 1.329 | Stabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
A/K | 0.9874 | likely_pathogenic | 0.9908 | pathogenic | -0.028 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
A/L | 0.5508 | ambiguous | 0.5625 | ambiguous | 1.329 | Stabilizing | 0.997 | D | 0.703 | prob.neutral | None | None | None | None | N |
A/M | 0.6414 | likely_pathogenic | 0.6468 | pathogenic | 0.7 | Stabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
A/N | 0.944 | likely_pathogenic | 0.9438 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
A/P | 0.9727 | likely_pathogenic | 0.9768 | pathogenic | 0.811 | Stabilizing | 1.0 | D | 0.835 | deleterious | D | 0.622582501 | None | None | N |
A/Q | 0.929 | likely_pathogenic | 0.939 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
A/R | 0.9628 | likely_pathogenic | 0.9737 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
A/S | 0.2346 | likely_benign | 0.1987 | benign | -1.036 | Destabilizing | 0.998 | D | 0.642 | neutral | N | 0.414102816 | None | None | N |
A/T | 0.3401 | ambiguous | 0.3089 | benign | -0.536 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | N | 0.443266406 | None | None | N |
A/V | 0.3528 | ambiguous | 0.3499 | ambiguous | 0.811 | Stabilizing | 0.996 | D | 0.647 | neutral | N | 0.467633291 | None | None | N |
A/W | 0.977 | likely_pathogenic | 0.9797 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
A/Y | 0.9198 | likely_pathogenic | 0.9279 | pathogenic | -0.193 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.