Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5322 | 16189;16190;16191 | chr2:178733329;178733328;178733327 | chr2:179598056;179598055;179598054 |
N2AB | 5005 | 15238;15239;15240 | chr2:178733329;178733328;178733327 | chr2:179598056;179598055;179598054 |
N2A | 4078 | 12457;12458;12459 | chr2:178733329;178733328;178733327 | chr2:179598056;179598055;179598054 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs758182029 | 0.016 | 0.896 | D | 0.502 | 0.339 | 0.437527004654 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
S/L | rs758182029 | 0.016 | 0.896 | D | 0.502 | 0.339 | 0.437527004654 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
S/L | rs758182029 | 0.016 | 0.896 | D | 0.502 | 0.339 | 0.437527004654 | gnomAD-4.0.0 | 2.35488E-05 | None | None | None | None | I | None | 0 | 1.667E-05 | None | 0 | 0 | None | 0 | 0 | 3.05142E-05 | 0 | 1.60133E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0707 | likely_benign | 0.0771 | benign | -0.511 | Destabilizing | 0.026 | N | 0.267 | neutral | N | 0.455195604 | None | None | I |
S/C | 0.1837 | likely_benign | 0.1658 | benign | -0.364 | Destabilizing | 0.997 | D | 0.453 | neutral | None | None | None | None | I |
S/D | 0.5772 | likely_pathogenic | 0.5609 | ambiguous | -0.295 | Destabilizing | 0.959 | D | 0.395 | neutral | None | None | None | None | I |
S/E | 0.6666 | likely_pathogenic | 0.6456 | pathogenic | -0.327 | Destabilizing | 0.919 | D | 0.416 | neutral | None | None | None | None | I |
S/F | 0.2793 | likely_benign | 0.24 | benign | -0.753 | Destabilizing | 0.988 | D | 0.577 | neutral | None | None | None | None | I |
S/G | 0.1199 | likely_benign | 0.1273 | benign | -0.735 | Destabilizing | 0.851 | D | 0.423 | neutral | None | None | None | None | I |
S/H | 0.4518 | ambiguous | 0.4302 | ambiguous | -1.292 | Destabilizing | 0.999 | D | 0.447 | neutral | None | None | None | None | I |
S/I | 0.2914 | likely_benign | 0.2702 | benign | -0.035 | Destabilizing | 0.976 | D | 0.553 | neutral | None | None | None | None | I |
S/K | 0.7792 | likely_pathogenic | 0.7504 | pathogenic | -0.745 | Destabilizing | 0.919 | D | 0.411 | neutral | None | None | None | None | I |
S/L | 0.1079 | likely_benign | 0.108 | benign | -0.035 | Destabilizing | 0.896 | D | 0.502 | neutral | D | 0.592309442 | None | None | I |
S/M | 0.2295 | likely_benign | 0.2324 | benign | 0.269 | Stabilizing | 0.999 | D | 0.438 | neutral | None | None | None | None | I |
S/N | 0.215 | likely_benign | 0.2234 | benign | -0.601 | Destabilizing | 0.959 | D | 0.451 | neutral | None | None | None | None | I |
S/P | 0.6509 | likely_pathogenic | 0.681 | pathogenic | -0.16 | Destabilizing | 0.984 | D | 0.427 | neutral | N | 0.516449955 | None | None | I |
S/Q | 0.5905 | likely_pathogenic | 0.5821 | pathogenic | -0.8 | Destabilizing | 0.988 | D | 0.384 | neutral | None | None | None | None | I |
S/R | 0.7034 | likely_pathogenic | 0.6653 | pathogenic | -0.592 | Destabilizing | 0.988 | D | 0.424 | neutral | None | None | None | None | I |
S/T | 0.0878 | likely_benign | 0.0972 | benign | -0.612 | Destabilizing | 0.046 | N | 0.234 | neutral | N | 0.513721747 | None | None | I |
S/V | 0.2281 | likely_benign | 0.2266 | benign | -0.16 | Destabilizing | 0.851 | D | 0.516 | neutral | None | None | None | None | I |
S/W | 0.4822 | ambiguous | 0.444 | ambiguous | -0.753 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | I |
S/Y | 0.2558 | likely_benign | 0.2157 | benign | -0.494 | Destabilizing | 0.996 | D | 0.577 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.