Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC532216189;16190;16191 chr2:178733329;178733328;178733327chr2:179598056;179598055;179598054
N2AB500515238;15239;15240 chr2:178733329;178733328;178733327chr2:179598056;179598055;179598054
N2A407812457;12458;12459 chr2:178733329;178733328;178733327chr2:179598056;179598055;179598054
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: TCA
  • RefSeq wild type template codon: AGT
  • Domain: Ig-36
  • Domain position: 62
  • Structural Position: 143
  • Q(SASA): 0.6191
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/L rs758182029 0.016 0.896 D 0.502 0.339 0.437527004654 gnomAD-2.1.1 8.05E-06 None None None None I None 0 2.9E-05 None 0 0 None 0 None 0 8.9E-06 0
S/L rs758182029 0.016 0.896 D 0.502 0.339 0.437527004654 gnomAD-3.1.2 1.97E-05 None None None None I None 0 0 0 0 0 None 0 0 4.41E-05 0 0
S/L rs758182029 0.016 0.896 D 0.502 0.339 0.437527004654 gnomAD-4.0.0 2.35488E-05 None None None None I None 0 1.667E-05 None 0 0 None 0 0 3.05142E-05 0 1.60133E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.0707 likely_benign 0.0771 benign -0.511 Destabilizing 0.026 N 0.267 neutral N 0.455195604 None None I
S/C 0.1837 likely_benign 0.1658 benign -0.364 Destabilizing 0.997 D 0.453 neutral None None None None I
S/D 0.5772 likely_pathogenic 0.5609 ambiguous -0.295 Destabilizing 0.959 D 0.395 neutral None None None None I
S/E 0.6666 likely_pathogenic 0.6456 pathogenic -0.327 Destabilizing 0.919 D 0.416 neutral None None None None I
S/F 0.2793 likely_benign 0.24 benign -0.753 Destabilizing 0.988 D 0.577 neutral None None None None I
S/G 0.1199 likely_benign 0.1273 benign -0.735 Destabilizing 0.851 D 0.423 neutral None None None None I
S/H 0.4518 ambiguous 0.4302 ambiguous -1.292 Destabilizing 0.999 D 0.447 neutral None None None None I
S/I 0.2914 likely_benign 0.2702 benign -0.035 Destabilizing 0.976 D 0.553 neutral None None None None I
S/K 0.7792 likely_pathogenic 0.7504 pathogenic -0.745 Destabilizing 0.919 D 0.411 neutral None None None None I
S/L 0.1079 likely_benign 0.108 benign -0.035 Destabilizing 0.896 D 0.502 neutral D 0.592309442 None None I
S/M 0.2295 likely_benign 0.2324 benign 0.269 Stabilizing 0.999 D 0.438 neutral None None None None I
S/N 0.215 likely_benign 0.2234 benign -0.601 Destabilizing 0.959 D 0.451 neutral None None None None I
S/P 0.6509 likely_pathogenic 0.681 pathogenic -0.16 Destabilizing 0.984 D 0.427 neutral N 0.516449955 None None I
S/Q 0.5905 likely_pathogenic 0.5821 pathogenic -0.8 Destabilizing 0.988 D 0.384 neutral None None None None I
S/R 0.7034 likely_pathogenic 0.6653 pathogenic -0.592 Destabilizing 0.988 D 0.424 neutral None None None None I
S/T 0.0878 likely_benign 0.0972 benign -0.612 Destabilizing 0.046 N 0.234 neutral N 0.513721747 None None I
S/V 0.2281 likely_benign 0.2266 benign -0.16 Destabilizing 0.851 D 0.516 neutral None None None None I
S/W 0.4822 ambiguous 0.444 ambiguous -0.753 Destabilizing 0.999 D 0.698 prob.neutral None None None None I
S/Y 0.2558 likely_benign 0.2157 benign -0.494 Destabilizing 0.996 D 0.577 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.