Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5326 | 16201;16202;16203 | chr2:178733317;178733316;178733315 | chr2:179598044;179598043;179598042 |
N2AB | 5009 | 15250;15251;15252 | chr2:178733317;178733316;178733315 | chr2:179598044;179598043;179598042 |
N2A | 4082 | 12469;12470;12471 | chr2:178733317;178733316;178733315 | chr2:179598044;179598043;179598042 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | None | None | 0.049 | N | 0.213 | 0.169 | 0.0846915920261 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1277 | likely_benign | 0.1276 | benign | 0.465 | Stabilizing | 0.006 | N | 0.181 | neutral | None | None | None | None | I |
H/C | 0.1868 | likely_benign | 0.1738 | benign | 0.758 | Stabilizing | 0.781 | D | 0.241 | neutral | None | None | None | None | I |
H/D | 0.107 | likely_benign | 0.1062 | benign | 0.019 | Stabilizing | 0.049 | N | 0.213 | neutral | N | 0.366051994 | None | None | I |
H/E | 0.1399 | likely_benign | 0.1439 | benign | 0.025 | Stabilizing | 0.015 | N | 0.159 | neutral | None | None | None | None | I |
H/F | 0.2674 | likely_benign | 0.2656 | benign | 0.947 | Stabilizing | 0.076 | N | 0.346 | neutral | None | None | None | None | I |
H/G | 0.1414 | likely_benign | 0.1369 | benign | 0.22 | Stabilizing | None | N | 0.106 | neutral | None | None | None | None | I |
H/I | 0.2297 | likely_benign | 0.2322 | benign | 1.073 | Stabilizing | 0.142 | N | 0.38 | neutral | None | None | None | None | I |
H/K | 0.1708 | likely_benign | 0.1628 | benign | 0.387 | Stabilizing | 0.015 | N | 0.189 | neutral | None | None | None | None | I |
H/L | 0.0852 | likely_benign | 0.0826 | benign | 1.073 | Stabilizing | 0.025 | N | 0.221 | neutral | N | 0.41145583 | None | None | I |
H/M | 0.3135 | likely_benign | 0.3136 | benign | 0.832 | Stabilizing | 0.54 | D | 0.247 | neutral | None | None | None | None | I |
H/N | 0.0583 | likely_benign | 0.0578 | benign | 0.391 | Stabilizing | 0.049 | N | 0.172 | neutral | N | 0.335747752 | None | None | I |
H/P | 0.0916 | likely_benign | 0.0931 | benign | 0.896 | Stabilizing | 0.202 | N | 0.329 | neutral | N | 0.447510343 | None | None | I |
H/Q | 0.0908 | likely_benign | 0.0923 | benign | 0.45 | Stabilizing | 0.001 | N | 0.086 | neutral | N | 0.347970945 | None | None | I |
H/R | 0.089 | likely_benign | 0.082 | benign | -0.125 | Destabilizing | None | N | 0.125 | neutral | N | 0.370225788 | None | None | I |
H/S | 0.1092 | likely_benign | 0.108 | benign | 0.486 | Stabilizing | 0.003 | N | 0.139 | neutral | None | None | None | None | I |
H/T | 0.1443 | likely_benign | 0.1448 | benign | 0.587 | Stabilizing | 0.033 | N | 0.183 | neutral | None | None | None | None | I |
H/V | 0.1694 | likely_benign | 0.1709 | benign | 0.896 | Stabilizing | 0.064 | N | 0.264 | neutral | None | None | None | None | I |
H/W | 0.3233 | likely_benign | 0.3134 | benign | 0.853 | Stabilizing | 0.54 | D | 0.239 | neutral | None | None | None | None | I |
H/Y | 0.1024 | likely_benign | 0.1013 | benign | 1.177 | Stabilizing | None | N | 0.151 | neutral | N | 0.438449432 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.