Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5331 | 16216;16217;16218 | chr2:178733302;178733301;178733300 | chr2:179598029;179598028;179598027 |
N2AB | 5014 | 15265;15266;15267 | chr2:178733302;178733301;178733300 | chr2:179598029;179598028;179598027 |
N2A | 4087 | 12484;12485;12486 | chr2:178733302;178733301;178733300 | chr2:179598029;179598028;179598027 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs369924189 | -0.998 | 0.999 | D | 0.824 | 0.785 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs369924189 | -0.998 | 0.999 | D | 0.824 | 0.785 | None | gnomAD-4.0.0 | 2.56281E-06 | None | None | None | None | N | None | 3.38123E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9949 | likely_pathogenic | 0.9942 | pathogenic | -2.52 | Highly Destabilizing | 0.953 | D | 0.794 | deleterious | None | None | None | None | N |
Y/C | 0.9288 | likely_pathogenic | 0.9139 | pathogenic | -1.991 | Destabilizing | 0.999 | D | 0.824 | deleterious | D | 0.661316994 | None | None | N |
Y/D | 0.9967 | likely_pathogenic | 0.9969 | pathogenic | -3.005 | Highly Destabilizing | 0.997 | D | 0.859 | deleterious | D | 0.661316994 | None | None | N |
Y/E | 0.9984 | likely_pathogenic | 0.9983 | pathogenic | -2.758 | Highly Destabilizing | 0.998 | D | 0.828 | deleterious | None | None | None | None | N |
Y/F | 0.3254 | likely_benign | 0.2962 | benign | -0.924 | Destabilizing | 0.939 | D | 0.672 | neutral | D | 0.599662996 | None | None | N |
Y/G | 0.9892 | likely_pathogenic | 0.9888 | pathogenic | -2.984 | Highly Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
Y/H | 0.9761 | likely_pathogenic | 0.9749 | pathogenic | -2.178 | Highly Destabilizing | 0.997 | D | 0.706 | prob.neutral | D | 0.66111519 | None | None | N |
Y/I | 0.911 | likely_pathogenic | 0.873 | pathogenic | -0.985 | Destabilizing | 0.128 | N | 0.63 | neutral | None | None | None | None | N |
Y/K | 0.9983 | likely_pathogenic | 0.9983 | pathogenic | -2.012 | Highly Destabilizing | 0.993 | D | 0.83 | deleterious | None | None | None | None | N |
Y/L | 0.8414 | likely_pathogenic | 0.7939 | pathogenic | -0.985 | Destabilizing | 0.807 | D | 0.743 | deleterious | None | None | None | None | N |
Y/M | 0.9646 | likely_pathogenic | 0.9546 | pathogenic | -1.126 | Destabilizing | 0.996 | D | 0.758 | deleterious | None | None | None | None | N |
Y/N | 0.978 | likely_pathogenic | 0.9789 | pathogenic | -2.91 | Highly Destabilizing | 0.997 | D | 0.839 | deleterious | D | 0.661316994 | None | None | N |
Y/P | 0.9989 | likely_pathogenic | 0.9989 | pathogenic | -1.513 | Destabilizing | 0.998 | D | 0.863 | deleterious | None | None | None | None | N |
Y/Q | 0.998 | likely_pathogenic | 0.998 | pathogenic | -2.493 | Highly Destabilizing | 0.998 | D | 0.752 | deleterious | None | None | None | None | N |
Y/R | 0.9951 | likely_pathogenic | 0.9952 | pathogenic | -2.156 | Highly Destabilizing | 0.998 | D | 0.834 | deleterious | None | None | None | None | N |
Y/S | 0.9912 | likely_pathogenic | 0.9911 | pathogenic | -3.292 | Highly Destabilizing | 0.991 | D | 0.826 | deleterious | D | 0.661316994 | None | None | N |
Y/T | 0.9953 | likely_pathogenic | 0.9946 | pathogenic | -2.896 | Highly Destabilizing | 0.986 | D | 0.82 | deleterious | None | None | None | None | N |
Y/V | 0.8729 | likely_pathogenic | 0.8352 | pathogenic | -1.513 | Destabilizing | 0.91 | D | 0.75 | deleterious | None | None | None | None | N |
Y/W | 0.8973 | likely_pathogenic | 0.8975 | pathogenic | -0.274 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.