Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5339 | 16240;16241;16242 | chr2:178733278;178733277;178733276 | chr2:179598005;179598004;179598003 |
N2AB | 5022 | 15289;15290;15291 | chr2:178733278;178733277;178733276 | chr2:179598005;179598004;179598003 |
N2A | 4095 | 12508;12509;12510 | chr2:178733278;178733277;178733276 | chr2:179598005;179598004;179598003 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs2080875658 | None | 0.489 | D | 0.472 | 0.261 | 0.376216005999 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1811 | likely_benign | 0.1612 | benign | -0.316 | Destabilizing | 0.014 | N | 0.299 | neutral | N | 0.515799148 | None | None | I |
V/C | 0.8493 | likely_pathogenic | 0.8278 | pathogenic | -0.791 | Destabilizing | 0.994 | D | 0.561 | neutral | None | None | None | None | I |
V/D | 0.704 | likely_pathogenic | 0.6494 | pathogenic | -0.333 | Destabilizing | 0.978 | D | 0.663 | neutral | None | None | None | None | I |
V/E | 0.5827 | likely_pathogenic | 0.5511 | ambiguous | -0.456 | Destabilizing | 0.942 | D | 0.58 | neutral | N | 0.513435504 | None | None | I |
V/F | 0.1626 | likely_benign | 0.146 | benign | -0.73 | Destabilizing | 0.915 | D | 0.499 | neutral | None | None | None | None | I |
V/G | 0.3915 | ambiguous | 0.3492 | ambiguous | -0.362 | Destabilizing | 0.698 | D | 0.561 | neutral | N | 0.506496517 | None | None | I |
V/H | 0.7898 | likely_pathogenic | 0.7656 | pathogenic | 0.016 | Stabilizing | 0.994 | D | 0.659 | neutral | None | None | None | None | I |
V/I | 0.1103 | likely_benign | 0.1097 | benign | -0.339 | Destabilizing | 0.86 | D | 0.441 | neutral | None | None | None | None | I |
V/K | 0.8054 | likely_pathogenic | 0.7908 | pathogenic | -0.323 | Destabilizing | 0.956 | D | 0.592 | neutral | None | None | None | None | I |
V/L | 0.4813 | ambiguous | 0.4281 | ambiguous | -0.339 | Destabilizing | 0.489 | N | 0.472 | neutral | D | 0.524477346 | None | None | I |
V/M | 0.2626 | likely_benign | 0.2498 | benign | -0.525 | Destabilizing | 0.99 | D | 0.483 | neutral | N | 0.509320901 | None | None | I |
V/N | 0.5847 | likely_pathogenic | 0.5407 | ambiguous | -0.133 | Destabilizing | 0.978 | D | 0.667 | neutral | None | None | None | None | I |
V/P | 0.9625 | likely_pathogenic | 0.9542 | pathogenic | -0.304 | Destabilizing | 0.978 | D | 0.635 | neutral | None | None | None | None | I |
V/Q | 0.6973 | likely_pathogenic | 0.6566 | pathogenic | -0.358 | Destabilizing | 0.978 | D | 0.642 | neutral | None | None | None | None | I |
V/R | 0.726 | likely_pathogenic | 0.6917 | pathogenic | 0.128 | Stabilizing | 0.978 | D | 0.663 | neutral | None | None | None | None | I |
V/S | 0.3735 | ambiguous | 0.3348 | benign | -0.44 | Destabilizing | 0.754 | D | 0.533 | neutral | None | None | None | None | I |
V/T | 0.3119 | likely_benign | 0.2939 | benign | -0.473 | Destabilizing | 0.86 | D | 0.458 | neutral | None | None | None | None | I |
V/W | 0.8688 | likely_pathogenic | 0.8559 | pathogenic | -0.775 | Destabilizing | 0.998 | D | 0.69 | prob.neutral | None | None | None | None | I |
V/Y | 0.612 | likely_pathogenic | 0.5742 | pathogenic | -0.499 | Destabilizing | 0.16 | N | 0.401 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.