Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5344 | 16255;16256;16257 | chr2:178733263;178733262;178733261 | chr2:179597990;179597989;179597988 |
N2AB | 5027 | 15304;15305;15306 | chr2:178733263;178733262;178733261 | chr2:179597990;179597989;179597988 |
N2A | 4100 | 12523;12524;12525 | chr2:178733263;178733262;178733261 | chr2:179597990;179597989;179597988 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | None | None | 1.0 | N | 0.907 | 0.628 | 0.874387943856 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
C/Y | None | None | 1.0 | N | 0.906 | 0.401 | 0.806643597941 | gnomAD-4.0.0 | 1.60987E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4596E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3305 | likely_benign | 0.3665 | ambiguous | -1.717 | Destabilizing | 0.998 | D | 0.603 | neutral | None | None | None | None | N |
C/D | 0.6642 | likely_pathogenic | 0.751 | pathogenic | 0.04 | Stabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
C/E | 0.7648 | likely_pathogenic | 0.8362 | pathogenic | 0.146 | Stabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
C/F | 0.2793 | likely_benign | 0.3219 | benign | -1.145 | Destabilizing | 1.0 | D | 0.905 | deleterious | N | 0.513115882 | None | None | N |
C/G | 0.1929 | likely_benign | 0.2107 | benign | -2.019 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.492049112 | None | None | N |
C/H | 0.5818 | likely_pathogenic | 0.6685 | pathogenic | -1.924 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
C/I | 0.536 | ambiguous | 0.5983 | pathogenic | -0.943 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
C/K | 0.8088 | likely_pathogenic | 0.8648 | pathogenic | -0.634 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
C/L | 0.507 | ambiguous | 0.5778 | pathogenic | -0.943 | Destabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
C/M | 0.6324 | likely_pathogenic | 0.6884 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
C/N | 0.5854 | likely_pathogenic | 0.659 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
C/P | 0.9844 | likely_pathogenic | 0.9908 | pathogenic | -1.175 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
C/Q | 0.6126 | likely_pathogenic | 0.6911 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
C/R | 0.4577 | ambiguous | 0.5541 | ambiguous | -0.571 | Destabilizing | 1.0 | D | 0.907 | deleterious | N | 0.502809533 | None | None | N |
C/S | 0.2184 | likely_benign | 0.2394 | benign | -1.252 | Destabilizing | 1.0 | D | 0.8 | deleterious | N | 0.50758231 | None | None | N |
C/T | 0.3719 | ambiguous | 0.4144 | ambiguous | -0.949 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
C/V | 0.4206 | ambiguous | 0.4747 | ambiguous | -1.175 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
C/W | 0.605 | likely_pathogenic | 0.6828 | pathogenic | -1.084 | Destabilizing | 1.0 | D | 0.879 | deleterious | N | 0.510913836 | None | None | N |
C/Y | 0.4228 | ambiguous | 0.5248 | ambiguous | -1.069 | Destabilizing | 1.0 | D | 0.906 | deleterious | N | 0.510406857 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.