Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5345 | 16258;16259;16260 | chr2:178733260;178733259;178733258 | chr2:179597987;179597986;179597985 |
N2AB | 5028 | 15307;15308;15309 | chr2:178733260;178733259;178733258 | chr2:179597987;179597986;179597985 |
N2A | 4101 | 12526;12527;12528 | chr2:178733260;178733259;178733258 | chr2:179597987;179597986;179597985 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1298041878 | -0.231 | 0.425 | N | 0.335 | 0.095 | 0.282575091529 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1359 | likely_benign | 0.1556 | benign | -0.238 | Destabilizing | 0.139 | N | 0.271 | neutral | N | 0.439437307 | None | None | N |
E/C | 0.789 | likely_pathogenic | 0.8336 | pathogenic | 0.263 | Stabilizing | 0.981 | D | 0.562 | neutral | None | None | None | None | N |
E/D | 0.1373 | likely_benign | 0.1526 | benign | -0.324 | Destabilizing | 0.425 | N | 0.335 | neutral | N | 0.445632561 | None | None | N |
E/F | 0.6654 | likely_pathogenic | 0.7311 | pathogenic | -0.371 | Destabilizing | 0.944 | D | 0.624 | neutral | None | None | None | None | N |
E/G | 0.1498 | likely_benign | 0.1743 | benign | -0.424 | Destabilizing | 0.425 | N | 0.462 | neutral | N | 0.485825745 | None | None | N |
E/H | 0.3389 | likely_benign | 0.3969 | ambiguous | -0.339 | Destabilizing | 0.981 | D | 0.493 | neutral | None | None | None | None | N |
E/I | 0.3024 | likely_benign | 0.3603 | ambiguous | 0.209 | Stabilizing | 0.543 | D | 0.529 | neutral | None | None | None | None | N |
E/K | 0.0964 | likely_benign | 0.1082 | benign | 0.443 | Stabilizing | 0.002 | N | 0.144 | neutral | N | 0.40116692 | None | None | N |
E/L | 0.3423 | ambiguous | 0.4077 | ambiguous | 0.209 | Stabilizing | 0.329 | N | 0.448 | neutral | None | None | None | None | N |
E/M | 0.3674 | ambiguous | 0.4305 | ambiguous | 0.441 | Stabilizing | 0.944 | D | 0.569 | neutral | None | None | None | None | N |
E/N | 0.2033 | likely_benign | 0.2428 | benign | 0.29 | Stabilizing | 0.704 | D | 0.331 | neutral | None | None | None | None | N |
E/P | 0.5509 | ambiguous | 0.6209 | pathogenic | 0.081 | Stabilizing | 0.828 | D | 0.485 | neutral | None | None | None | None | N |
E/Q | 0.104 | likely_benign | 0.1131 | benign | 0.29 | Stabilizing | 0.642 | D | 0.365 | neutral | N | 0.457196349 | None | None | N |
E/R | 0.1736 | likely_benign | 0.2004 | benign | 0.485 | Stabilizing | 0.543 | D | 0.347 | neutral | None | None | None | None | N |
E/S | 0.1445 | likely_benign | 0.1705 | benign | 0.112 | Stabilizing | 0.037 | N | 0.139 | neutral | None | None | None | None | N |
E/T | 0.1414 | likely_benign | 0.1676 | benign | 0.256 | Stabilizing | 0.004 | N | 0.211 | neutral | None | None | None | None | N |
E/V | 0.1825 | likely_benign | 0.2133 | benign | 0.081 | Stabilizing | 0.01 | N | 0.283 | neutral | N | 0.467143983 | None | None | N |
E/W | 0.8588 | likely_pathogenic | 0.8971 | pathogenic | -0.317 | Destabilizing | 0.995 | D | 0.567 | neutral | None | None | None | None | N |
E/Y | 0.5397 | ambiguous | 0.6105 | pathogenic | -0.141 | Destabilizing | 0.981 | D | 0.597 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.