Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5346 | 16261;16262;16263 | chr2:178733257;178733256;178733255 | chr2:179597984;179597983;179597982 |
N2AB | 5029 | 15310;15311;15312 | chr2:178733257;178733256;178733255 | chr2:179597984;179597983;179597982 |
N2A | 4102 | 12529;12530;12531 | chr2:178733257;178733256;178733255 | chr2:179597984;179597983;179597982 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1010676727 | 0.059 | 0.959 | N | 0.752 | 0.395 | 0.452737964553 | gnomAD-2.1.1 | 4.17E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.26E-06 | 0 |
T/I | rs1010676727 | 0.059 | 0.959 | N | 0.752 | 0.395 | 0.452737964553 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
T/I | rs1010676727 | 0.059 | 0.959 | N | 0.752 | 0.395 | 0.452737964553 | gnomAD-4.0.0 | 1.93318E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.55457E-05 | 0 | 1.61207E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1087 | likely_benign | 0.1023 | benign | -1.144 | Destabilizing | 0.061 | N | 0.151 | neutral | N | 0.369147716 | None | None | N |
T/C | 0.5787 | likely_pathogenic | 0.5765 | pathogenic | -0.869 | Destabilizing | 0.046 | N | 0.323 | neutral | None | None | None | None | N |
T/D | 0.7117 | likely_pathogenic | 0.6938 | pathogenic | -1.311 | Destabilizing | 0.991 | D | 0.765 | deleterious | None | None | None | None | N |
T/E | 0.6811 | likely_pathogenic | 0.6532 | pathogenic | -1.135 | Destabilizing | 0.991 | D | 0.762 | deleterious | None | None | None | None | N |
T/F | 0.6258 | likely_pathogenic | 0.5931 | pathogenic | -0.755 | Destabilizing | 0.997 | D | 0.773 | deleterious | None | None | None | None | N |
T/G | 0.4043 | ambiguous | 0.3965 | ambiguous | -1.567 | Destabilizing | 0.939 | D | 0.697 | prob.neutral | None | None | None | None | N |
T/H | 0.6365 | likely_pathogenic | 0.6043 | pathogenic | -1.694 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/I | 0.3705 | ambiguous | 0.3412 | ambiguous | -0.043 | Destabilizing | 0.959 | D | 0.752 | deleterious | N | 0.473104377 | None | None | N |
T/K | 0.6567 | likely_pathogenic | 0.5971 | pathogenic | -0.723 | Destabilizing | 0.991 | D | 0.755 | deleterious | None | None | None | None | N |
T/L | 0.2605 | likely_benign | 0.2408 | benign | -0.043 | Destabilizing | 0.939 | D | 0.651 | neutral | None | None | None | None | N |
T/M | 0.1421 | likely_benign | 0.1279 | benign | 0.028 | Stabilizing | 0.997 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/N | 0.2812 | likely_benign | 0.2489 | benign | -1.311 | Destabilizing | 0.996 | D | 0.718 | prob.delet. | D | 0.524824063 | None | None | N |
T/P | 0.8377 | likely_pathogenic | 0.8249 | pathogenic | -0.377 | Destabilizing | 0.988 | D | 0.766 | deleterious | N | 0.519071527 | None | None | N |
T/Q | 0.5926 | likely_pathogenic | 0.5539 | ambiguous | -1.134 | Destabilizing | 0.997 | D | 0.77 | deleterious | None | None | None | None | N |
T/R | 0.5986 | likely_pathogenic | 0.5402 | ambiguous | -0.867 | Destabilizing | 0.991 | D | 0.761 | deleterious | None | None | None | None | N |
T/S | 0.1995 | likely_benign | 0.1925 | benign | -1.563 | Destabilizing | 0.704 | D | 0.606 | neutral | N | 0.452750534 | None | None | N |
T/V | 0.2339 | likely_benign | 0.2203 | benign | -0.377 | Destabilizing | 0.939 | D | 0.621 | neutral | None | None | None | None | N |
T/W | 0.913 | likely_pathogenic | 0.9025 | pathogenic | -0.844 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | N |
T/Y | 0.643 | likely_pathogenic | 0.6035 | pathogenic | -0.509 | Destabilizing | 0.997 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.