Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5348 | 16267;16268;16269 | chr2:178733251;178733250;178733249 | chr2:179597978;179597977;179597976 |
N2AB | 5031 | 15316;15317;15318 | chr2:178733251;178733250;178733249 | chr2:179597978;179597977;179597976 |
N2A | 4104 | 12535;12536;12537 | chr2:178733251;178733250;178733249 | chr2:179597978;179597977;179597976 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | rs766802878 | -2.203 | 0.978 | N | 0.761 | 0.41 | 0.652953024311 | gnomAD-2.1.1 | 4.23E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
F/C | rs766802878 | -2.203 | 0.978 | N | 0.761 | 0.41 | 0.652953024311 | gnomAD-4.0.0 | 3.24993E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77886E-05 | None | 0 | 0 | 0 | 1.49254E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9539 | likely_pathogenic | 0.9376 | pathogenic | -2.186 | Highly Destabilizing | 0.228 | N | 0.582 | neutral | None | None | None | None | N |
F/C | 0.7769 | likely_pathogenic | 0.6645 | pathogenic | -1.4 | Destabilizing | 0.978 | D | 0.761 | deleterious | N | 0.46186501 | None | None | N |
F/D | 0.9975 | likely_pathogenic | 0.9971 | pathogenic | -2.944 | Highly Destabilizing | 0.94 | D | 0.769 | deleterious | None | None | None | None | N |
F/E | 0.9955 | likely_pathogenic | 0.9952 | pathogenic | -2.692 | Highly Destabilizing | 0.836 | D | 0.767 | deleterious | None | None | None | None | N |
F/G | 0.9888 | likely_pathogenic | 0.9852 | pathogenic | -2.672 | Highly Destabilizing | 0.593 | D | 0.737 | prob.delet. | None | None | None | None | N |
F/H | 0.982 | likely_pathogenic | 0.978 | pathogenic | -1.768 | Destabilizing | 0.983 | D | 0.729 | prob.delet. | None | None | None | None | N |
F/I | 0.3186 | likely_benign | 0.2247 | benign | -0.601 | Destabilizing | 0.003 | N | 0.331 | neutral | N | 0.35558012 | None | None | N |
F/K | 0.9954 | likely_pathogenic | 0.9951 | pathogenic | -1.704 | Destabilizing | 0.836 | D | 0.757 | deleterious | None | None | None | None | N |
F/L | 0.7595 | likely_pathogenic | 0.6836 | pathogenic | -0.601 | Destabilizing | None | N | 0.307 | neutral | N | 0.23082882 | None | None | N |
F/M | 0.6445 | likely_pathogenic | 0.5581 | ambiguous | -0.508 | Destabilizing | 0.716 | D | 0.656 | neutral | None | None | None | None | N |
F/N | 0.9908 | likely_pathogenic | 0.9887 | pathogenic | -2.372 | Highly Destabilizing | 0.94 | D | 0.778 | deleterious | None | None | None | None | N |
F/P | 0.9986 | likely_pathogenic | 0.9981 | pathogenic | -1.142 | Destabilizing | 0.94 | D | 0.778 | deleterious | None | None | None | None | N |
F/Q | 0.9919 | likely_pathogenic | 0.9909 | pathogenic | -2.141 | Highly Destabilizing | 0.94 | D | 0.788 | deleterious | None | None | None | None | N |
F/R | 0.9877 | likely_pathogenic | 0.9877 | pathogenic | -1.655 | Destabilizing | 0.836 | D | 0.772 | deleterious | None | None | None | None | N |
F/S | 0.9793 | likely_pathogenic | 0.9706 | pathogenic | -2.896 | Highly Destabilizing | 0.523 | D | 0.698 | prob.neutral | N | 0.462038368 | None | None | N |
F/T | 0.9705 | likely_pathogenic | 0.9562 | pathogenic | -2.51 | Highly Destabilizing | 0.418 | N | 0.667 | neutral | None | None | None | None | N |
F/V | 0.3385 | likely_benign | 0.2486 | benign | -1.142 | Destabilizing | 0.003 | N | 0.401 | neutral | N | 0.272286733 | None | None | N |
F/W | 0.8695 | likely_pathogenic | 0.8416 | pathogenic | -0.054 | Destabilizing | 0.983 | D | 0.639 | neutral | None | None | None | None | N |
F/Y | 0.5392 | ambiguous | 0.497 | ambiguous | -0.402 | Destabilizing | 0.523 | D | 0.589 | neutral | N | 0.46186501 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.