Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5349 | 16270;16271;16272 | chr2:178733248;178733247;178733246 | chr2:179597975;179597974;179597973 |
N2AB | 5032 | 15319;15320;15321 | chr2:178733248;178733247;178733246 | chr2:179597975;179597974;179597973 |
N2A | 4105 | 12538;12539;12540 | chr2:178733248;178733247;178733246 | chr2:179597975;179597974;179597973 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2080869632 | None | 0.9 | D | 0.539 | 0.344 | 0.36036328697 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.54E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs2080869632 | None | 0.9 | D | 0.539 | 0.344 | 0.36036328697 | gnomAD-4.0.0 | 1.25084E-06 | None | None | None | None | I | None | 0 | 1.69285E-05 | None | 0 | 0 | None | 0 | 0 | 8.52979E-07 | 0 | 0 |
T/I | None | None | 0.997 | N | 0.645 | 0.42 | 0.600985507913 | gnomAD-4.0.0 | 1.63129E-06 | None | None | None | None | I | None | 5.75573E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/S | None | None | 0.63 | N | 0.347 | 0.308 | 0.296329037015 | gnomAD-4.0.0 | 6.91229E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.05525E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1081 | likely_benign | 0.0922 | benign | -1.068 | Destabilizing | 0.9 | D | 0.539 | neutral | D | 0.526074857 | None | None | I |
T/C | 0.5494 | ambiguous | 0.5031 | ambiguous | -0.623 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
T/D | 0.4431 | ambiguous | 0.3939 | ambiguous | 0.211 | Stabilizing | 0.967 | D | 0.574 | neutral | None | None | None | None | I |
T/E | 0.3179 | likely_benign | 0.3013 | benign | 0.283 | Stabilizing | 0.983 | D | 0.573 | neutral | None | None | None | None | I |
T/F | 0.2889 | likely_benign | 0.2547 | benign | -0.957 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | I |
T/G | 0.4274 | ambiguous | 0.3674 | ambiguous | -1.375 | Destabilizing | 0.983 | D | 0.613 | neutral | None | None | None | None | I |
T/H | 0.2356 | likely_benign | 0.2121 | benign | -1.413 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
T/I | 0.1958 | likely_benign | 0.1652 | benign | -0.314 | Destabilizing | 0.997 | D | 0.645 | neutral | N | 0.498832327 | None | None | I |
T/K | 0.2181 | likely_benign | 0.1985 | benign | -0.328 | Destabilizing | 0.983 | D | 0.583 | neutral | None | None | None | None | I |
T/L | 0.1208 | likely_benign | 0.107 | benign | -0.314 | Destabilizing | 0.992 | D | 0.574 | neutral | None | None | None | None | I |
T/M | 0.1028 | likely_benign | 0.0947 | benign | -0.232 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | I |
T/N | 0.1637 | likely_benign | 0.1373 | benign | -0.439 | Destabilizing | 0.576 | D | 0.341 | neutral | N | 0.518148807 | None | None | I |
T/P | 0.5488 | ambiguous | 0.449 | ambiguous | -0.534 | Destabilizing | 0.997 | D | 0.644 | neutral | D | 0.524805037 | None | None | I |
T/Q | 0.2268 | likely_benign | 0.2123 | benign | -0.491 | Destabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | I |
T/R | 0.1525 | likely_benign | 0.1372 | benign | -0.26 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | I |
T/S | 0.1327 | likely_benign | 0.1164 | benign | -0.897 | Destabilizing | 0.63 | D | 0.347 | neutral | N | 0.52032232 | None | None | I |
T/V | 0.1535 | likely_benign | 0.1402 | benign | -0.534 | Destabilizing | 0.992 | D | 0.542 | neutral | None | None | None | None | I |
T/W | 0.5997 | likely_pathogenic | 0.5829 | pathogenic | -0.825 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
T/Y | 0.309 | likely_benign | 0.2815 | benign | -0.571 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.