Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5357 | 16294;16295;16296 | chr2:178733107;178733106;178733105 | chr2:179597834;179597833;179597832 |
N2AB | 5040 | 15343;15344;15345 | chr2:178733107;178733106;178733105 | chr2:179597834;179597833;179597832 |
N2A | 4113 | 12562;12563;12564 | chr2:178733107;178733106;178733105 | chr2:179597834;179597833;179597832 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1467703602 | -1.864 | 1.0 | D | 0.882 | 0.613 | 0.698733648705 | gnomAD-2.1.1 | 4.26E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.63E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.8743 | likely_pathogenic | 0.8871 | pathogenic | -1.703 | Destabilizing | 0.998 | D | 0.798 | deleterious | D | 0.612833866 | None | None | N |
P/C | 0.9946 | likely_pathogenic | 0.9953 | pathogenic | -1.218 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
P/D | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -1.525 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
P/E | 0.9982 | likely_pathogenic | 0.998 | pathogenic | -1.47 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
P/F | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -1.243 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
P/G | 0.9922 | likely_pathogenic | 0.9924 | pathogenic | -2.085 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/H | 0.9974 | likely_pathogenic | 0.9973 | pathogenic | -1.64 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
P/I | 0.9885 | likely_pathogenic | 0.9885 | pathogenic | -0.722 | Destabilizing | 0.998 | D | 0.868 | deleterious | None | None | None | None | N |
P/K | 0.999 | likely_pathogenic | 0.9988 | pathogenic | -1.216 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
P/L | 0.9499 | likely_pathogenic | 0.9579 | pathogenic | -0.722 | Destabilizing | 0.64 | D | 0.747 | deleterious | D | 0.625077871 | None | None | N |
P/M | 0.9961 | likely_pathogenic | 0.9967 | pathogenic | -0.615 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/N | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -1.09 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
P/Q | 0.9964 | likely_pathogenic | 0.9963 | pathogenic | -1.201 | Destabilizing | 1.0 | D | 0.882 | deleterious | D | 0.650817787 | None | None | N |
P/R | 0.9949 | likely_pathogenic | 0.9939 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.650817787 | None | None | N |
P/S | 0.9828 | likely_pathogenic | 0.9841 | pathogenic | -1.718 | Destabilizing | 1.0 | D | 0.882 | deleterious | D | 0.634162653 | None | None | N |
P/T | 0.981 | likely_pathogenic | 0.983 | pathogenic | -1.544 | Destabilizing | 0.999 | D | 0.872 | deleterious | D | 0.650615983 | None | None | N |
P/V | 0.9599 | likely_pathogenic | 0.9617 | pathogenic | -1.016 | Destabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | N |
P/W | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.483 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
P/Y | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.