Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5358 | 16297;16298;16299 | chr2:178733104;178733103;178733102 | chr2:179597831;179597830;179597829 |
N2AB | 5041 | 15346;15347;15348 | chr2:178733104;178733103;178733102 | chr2:179597831;179597830;179597829 |
N2A | 4114 | 12565;12566;12567 | chr2:178733104;178733103;178733102 | chr2:179597831;179597830;179597829 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | None | N | 0.107 | 0.062 | 0.18995819373 | gnomAD-4.0.0 | 1.38517E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.08041E-07 | 1.19832E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.3037 | likely_benign | 0.1868 | benign | -1.372 | Destabilizing | 0.016 | N | 0.28 | neutral | None | None | None | None | N |
F/C | 0.2323 | likely_benign | 0.1526 | benign | -0.608 | Destabilizing | 0.828 | D | 0.327 | neutral | N | 0.458233712 | None | None | N |
F/D | 0.7116 | likely_pathogenic | 0.5418 | ambiguous | 0.39 | Stabilizing | 0.072 | N | 0.385 | neutral | None | None | None | None | N |
F/E | 0.7176 | likely_pathogenic | 0.5844 | pathogenic | 0.417 | Stabilizing | 0.072 | N | 0.396 | neutral | None | None | None | None | N |
F/G | 0.6353 | likely_pathogenic | 0.4582 | ambiguous | -1.62 | Destabilizing | 0.038 | N | 0.335 | neutral | None | None | None | None | N |
F/H | 0.4008 | ambiguous | 0.3017 | benign | 0.042 | Stabilizing | 0.628 | D | 0.326 | neutral | None | None | None | None | N |
F/I | 0.1206 | likely_benign | 0.0872 | benign | -0.683 | Destabilizing | 0.029 | N | 0.211 | neutral | N | 0.411730631 | None | None | N |
F/K | 0.7235 | likely_pathogenic | 0.6083 | pathogenic | -0.476 | Destabilizing | 0.072 | N | 0.387 | neutral | None | None | None | None | N |
F/L | 0.5194 | ambiguous | 0.3836 | ambiguous | -0.683 | Destabilizing | None | N | 0.107 | neutral | N | 0.434183416 | None | None | N |
F/M | 0.3065 | likely_benign | 0.2223 | benign | -0.605 | Destabilizing | 0.12 | N | 0.358 | neutral | None | None | None | None | N |
F/N | 0.4416 | ambiguous | 0.2859 | benign | -0.502 | Destabilizing | 0.072 | N | 0.388 | neutral | None | None | None | None | N |
F/P | 0.9848 | likely_pathogenic | 0.9638 | pathogenic | -0.898 | Destabilizing | 0.356 | N | 0.413 | neutral | None | None | None | None | N |
F/Q | 0.5572 | ambiguous | 0.4345 | ambiguous | -0.527 | Destabilizing | 0.356 | N | 0.428 | neutral | None | None | None | None | N |
F/R | 0.5579 | ambiguous | 0.4384 | ambiguous | 0.04 | Stabilizing | 0.214 | N | 0.414 | neutral | None | None | None | None | N |
F/S | 0.2088 | likely_benign | 0.1213 | benign | -1.243 | Destabilizing | 0.001 | N | 0.277 | neutral | N | 0.346871076 | None | None | N |
F/T | 0.2631 | likely_benign | 0.1564 | benign | -1.121 | Destabilizing | None | N | 0.219 | neutral | None | None | None | None | N |
F/V | 0.1035 | likely_benign | 0.0772 | benign | -0.898 | Destabilizing | 0.012 | N | 0.263 | neutral | N | 0.396547748 | None | None | N |
F/W | 0.458 | ambiguous | 0.3666 | ambiguous | -0.169 | Destabilizing | 0.864 | D | 0.366 | neutral | None | None | None | None | N |
F/Y | 0.1298 | likely_benign | 0.1105 | benign | -0.298 | Destabilizing | 0.106 | N | 0.312 | neutral | N | 0.411383914 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.