Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5360 | 16303;16304;16305 | chr2:178733098;178733097;178733096 | chr2:179597825;179597824;179597823 |
N2AB | 5043 | 15352;15353;15354 | chr2:178733098;178733097;178733096 | chr2:179597825;179597824;179597823 |
N2A | 4116 | 12571;12572;12573 | chr2:178733098;178733097;178733096 | chr2:179597825;179597824;179597823 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs749081117 | -0.621 | 0.998 | N | 0.374 | 0.256 | 0.139678290688 | gnomAD-2.1.1 | 3.35E-05 | None | None | None | None | N | None | 0 | 2.63143E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs749081117 | -0.621 | 0.998 | N | 0.374 | 0.256 | 0.139678290688 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs749081117 | -0.621 | 0.998 | N | 0.374 | 0.256 | 0.139678290688 | gnomAD-4.0.0 | 5.00678E-06 | None | None | None | None | N | None | 0 | 1.36101E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1011 | likely_benign | 0.1106 | benign | -0.729 | Destabilizing | 0.998 | D | 0.374 | neutral | N | 0.503308988 | None | None | N |
T/C | 0.5253 | ambiguous | 0.5188 | ambiguous | -0.417 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
T/D | 0.6478 | likely_pathogenic | 0.6114 | pathogenic | 0.252 | Stabilizing | 0.504 | D | 0.285 | neutral | None | None | None | None | N |
T/E | 0.4982 | ambiguous | 0.453 | ambiguous | 0.293 | Stabilizing | 0.994 | D | 0.56 | neutral | None | None | None | None | N |
T/F | 0.3614 | ambiguous | 0.3423 | ambiguous | -0.801 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
T/G | 0.3237 | likely_benign | 0.3423 | ambiguous | -0.996 | Destabilizing | 0.998 | D | 0.628 | neutral | None | None | None | None | N |
T/H | 0.3756 | ambiguous | 0.3662 | ambiguous | -1.007 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/I | 0.1559 | likely_benign | 0.1468 | benign | -0.105 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.459920783 | None | None | N |
T/K | 0.3245 | likely_benign | 0.3001 | benign | -0.373 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
T/L | 0.0944 | likely_benign | 0.093 | benign | -0.105 | Destabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | N |
T/M | 0.1055 | likely_benign | 0.1061 | benign | -0.143 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
T/N | 0.2034 | likely_benign | 0.1976 | benign | -0.465 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.460758223 | None | None | N |
T/P | 0.1773 | likely_benign | 0.193 | benign | -0.281 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.490636858 | None | None | N |
T/Q | 0.2906 | likely_benign | 0.2809 | benign | -0.48 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
T/R | 0.2468 | likely_benign | 0.2323 | benign | -0.201 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
T/S | 0.1392 | likely_benign | 0.1419 | benign | -0.805 | Destabilizing | 0.996 | D | 0.365 | neutral | N | 0.44647427 | None | None | N |
T/V | 0.1237 | likely_benign | 0.124 | benign | -0.281 | Destabilizing | 1.0 | D | 0.505 | neutral | None | None | None | None | N |
T/W | 0.6984 | likely_pathogenic | 0.6757 | pathogenic | -0.811 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
T/Y | 0.4124 | ambiguous | 0.3937 | ambiguous | -0.521 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.