Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5362 | 16309;16310;16311 | chr2:178733092;178733091;178733090 | chr2:179597819;179597818;179597817 |
N2AB | 5045 | 15358;15359;15360 | chr2:178733092;178733091;178733090 | chr2:179597819;179597818;179597817 |
N2A | 4118 | 12577;12578;12579 | chr2:178733092;178733091;178733090 | chr2:179597819;179597818;179597817 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs2080839872 | None | 0.454 | N | 0.449 | 0.236 | 0.633181949713 | gnomAD-4.0.0 | 1.62566E-06 | None | None | None | None | N | None | 0 | 2.34544E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0844 | likely_benign | 0.0783 | benign | -0.904 | Destabilizing | 0.005 | N | 0.218 | neutral | N | 0.489748697 | None | None | N |
P/C | 0.573 | likely_pathogenic | 0.5322 | ambiguous | -0.647 | Destabilizing | 0.998 | D | 0.497 | neutral | None | None | None | None | N |
P/D | 0.5163 | ambiguous | 0.448 | ambiguous | -0.066 | Destabilizing | 0.842 | D | 0.402 | neutral | None | None | None | None | N |
P/E | 0.3168 | likely_benign | 0.2709 | benign | -0.098 | Destabilizing | 0.842 | D | 0.353 | neutral | None | None | None | None | N |
P/F | 0.5214 | ambiguous | 0.4718 | ambiguous | -0.668 | Destabilizing | 0.949 | D | 0.523 | neutral | None | None | None | None | N |
P/G | 0.2842 | likely_benign | 0.2688 | benign | -1.167 | Destabilizing | 0.525 | D | 0.421 | neutral | None | None | None | None | N |
P/H | 0.2224 | likely_benign | 0.1995 | benign | -0.63 | Destabilizing | 0.997 | D | 0.483 | neutral | N | 0.486383105 | None | None | N |
P/I | 0.3086 | likely_benign | 0.2725 | benign | -0.315 | Destabilizing | 0.904 | D | 0.482 | neutral | None | None | None | None | N |
P/K | 0.3146 | likely_benign | 0.2782 | benign | -0.6 | Destabilizing | 0.842 | D | 0.353 | neutral | None | None | None | None | N |
P/L | 0.144 | likely_benign | 0.1326 | benign | -0.315 | Destabilizing | 0.454 | N | 0.449 | neutral | N | 0.503024639 | None | None | N |
P/M | 0.288 | likely_benign | 0.2658 | benign | -0.33 | Destabilizing | 0.325 | N | 0.384 | neutral | None | None | None | None | N |
P/N | 0.308 | likely_benign | 0.2803 | benign | -0.338 | Destabilizing | 0.949 | D | 0.475 | neutral | None | None | None | None | N |
P/Q | 0.1508 | likely_benign | 0.1369 | benign | -0.483 | Destabilizing | 0.974 | D | 0.449 | neutral | None | None | None | None | N |
P/R | 0.2292 | likely_benign | 0.2039 | benign | -0.182 | Destabilizing | 0.966 | D | 0.479 | neutral | N | 0.472048371 | None | None | N |
P/S | 0.1263 | likely_benign | 0.1155 | benign | -0.915 | Destabilizing | 0.062 | N | 0.216 | neutral | N | 0.495578591 | None | None | N |
P/T | 0.1063 | likely_benign | 0.0954 | benign | -0.83 | Destabilizing | 0.669 | D | 0.363 | neutral | N | 0.48884462 | None | None | N |
P/V | 0.2047 | likely_benign | 0.1816 | benign | -0.474 | Destabilizing | 0.728 | D | 0.424 | neutral | None | None | None | None | N |
P/W | 0.7092 | likely_pathogenic | 0.6605 | pathogenic | -0.789 | Destabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | N |
P/Y | 0.4474 | ambiguous | 0.3933 | ambiguous | -0.488 | Destabilizing | 0.991 | D | 0.514 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.