Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5363 | 16312;16313;16314 | chr2:178733089;178733088;178733087 | chr2:179597816;179597815;179597814 |
N2AB | 5046 | 15361;15362;15363 | chr2:178733089;178733088;178733087 | chr2:179597816;179597815;179597814 |
N2A | 4119 | 12580;12581;12582 | chr2:178733089;178733088;178733087 | chr2:179597816;179597815;179597814 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs1272893628 | -2.48 | 1.0 | N | 0.826 | 0.485 | 0.750113076578 | gnomAD-2.1.1 | 4.13E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.75E-05 | 0 | 0 |
L/S | rs1272893628 | -2.48 | 1.0 | N | 0.826 | 0.485 | 0.750113076578 | gnomAD-4.0.0 | 4.85164E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.89423E-05 | 0 | 5.8214E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7353 | likely_pathogenic | 0.7503 | pathogenic | -2.082 | Highly Destabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | N |
L/C | 0.8574 | likely_pathogenic | 0.8779 | pathogenic | -1.481 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
L/D | 0.9963 | likely_pathogenic | 0.9972 | pathogenic | -1.263 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
L/E | 0.972 | likely_pathogenic | 0.9779 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
L/F | 0.6236 | likely_pathogenic | 0.6561 | pathogenic | -1.356 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.45779939 | None | None | N |
L/G | 0.9568 | likely_pathogenic | 0.9628 | pathogenic | -2.508 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/H | 0.9521 | likely_pathogenic | 0.9645 | pathogenic | -1.695 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
L/I | 0.1525 | likely_benign | 0.1588 | benign | -0.931 | Destabilizing | 0.999 | D | 0.547 | neutral | None | None | None | None | N |
L/K | 0.9694 | likely_pathogenic | 0.9763 | pathogenic | -1.291 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/M | 0.2511 | likely_benign | 0.2704 | benign | -0.847 | Destabilizing | 1.0 | D | 0.74 | deleterious | N | 0.470890442 | None | None | N |
L/N | 0.9676 | likely_pathogenic | 0.9748 | pathogenic | -1.214 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/P | 0.7157 | likely_pathogenic | 0.717 | pathogenic | -1.287 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/Q | 0.8627 | likely_pathogenic | 0.8934 | pathogenic | -1.281 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
L/R | 0.9358 | likely_pathogenic | 0.9498 | pathogenic | -0.856 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/S | 0.9142 | likely_pathogenic | 0.9277 | pathogenic | -2.028 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | N | 0.495248894 | None | None | N |
L/T | 0.7994 | likely_pathogenic | 0.8196 | pathogenic | -1.8 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
L/V | 0.1474 | likely_benign | 0.1431 | benign | -1.287 | Destabilizing | 0.999 | D | 0.525 | neutral | N | 0.475396666 | None | None | N |
L/W | 0.9313 | likely_pathogenic | 0.9528 | pathogenic | -1.452 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | D | 0.522760898 | None | None | N |
L/Y | 0.9624 | likely_pathogenic | 0.9715 | pathogenic | -1.22 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.