Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5365 | 16318;16319;16320 | chr2:178733083;178733082;178733081 | chr2:179597810;179597809;179597808 |
N2AB | 5048 | 15367;15368;15369 | chr2:178733083;178733082;178733081 | chr2:179597810;179597809;179597808 |
N2A | 4121 | 12586;12587;12588 | chr2:178733083;178733082;178733081 | chr2:179597810;179597809;179597808 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.002 | N | 0.104 | 0.121 | 0.112648838833 | gnomAD-4.0.0 | 1.37739E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80837E-06 | 0 | 0 |
N/I | rs2080837550 | None | 0.487 | N | 0.384 | 0.189 | 0.450152462452 | gnomAD-4.0.0 | 1.60988E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89491E-06 | 0 | 0 |
N/K | rs72648935 | 0.497 | 0.018 | N | 0.093 | 0.057 | 0.0297737177859 | gnomAD-2.1.1 | 4.12E-06 | None | None | None | None | N | None | 0 | 2.97E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/K | rs72648935 | 0.497 | 0.018 | N | 0.093 | 0.057 | 0.0297737177859 | gnomAD-4.0.0 | 6.87793E-07 | None | None | None | None | N | None | 0 | 2.26613E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/Y | rs878854288 | -0.396 | 0.794 | N | 0.315 | 0.328 | 0.44750879378 | gnomAD-2.1.1 | 4.13E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2135 | likely_benign | 0.2248 | benign | -0.231 | Destabilizing | 0.129 | N | 0.289 | neutral | None | None | None | None | N |
N/C | 0.4174 | ambiguous | 0.4282 | ambiguous | 0.361 | Stabilizing | 0.983 | D | 0.3 | neutral | None | None | None | None | N |
N/D | 0.1112 | likely_benign | 0.1089 | benign | 0.098 | Stabilizing | 0.002 | N | 0.104 | neutral | N | 0.411665476 | None | None | N |
N/E | 0.3429 | ambiguous | 0.3489 | ambiguous | 0.061 | Stabilizing | 0.129 | N | 0.297 | neutral | None | None | None | None | N |
N/F | 0.6059 | likely_pathogenic | 0.6271 | pathogenic | -0.624 | Destabilizing | 0.836 | D | 0.327 | neutral | None | None | None | None | N |
N/G | 0.2681 | likely_benign | 0.2795 | benign | -0.399 | Destabilizing | 0.228 | N | 0.281 | neutral | None | None | None | None | N |
N/H | 0.1333 | likely_benign | 0.1347 | benign | -0.456 | Destabilizing | 0.794 | D | 0.363 | neutral | N | 0.457390862 | None | None | N |
N/I | 0.2728 | likely_benign | 0.2877 | benign | 0.122 | Stabilizing | 0.487 | N | 0.384 | neutral | N | 0.481002072 | None | None | N |
N/K | 0.2721 | likely_benign | 0.2675 | benign | 0.114 | Stabilizing | 0.018 | N | 0.093 | neutral | N | 0.515160777 | None | None | N |
N/L | 0.2825 | likely_benign | 0.2955 | benign | 0.122 | Stabilizing | 0.264 | N | 0.37 | neutral | None | None | None | None | N |
N/M | 0.3463 | ambiguous | 0.3588 | ambiguous | 0.39 | Stabilizing | 0.836 | D | 0.308 | neutral | None | None | None | None | N |
N/P | 0.3461 | ambiguous | 0.3833 | ambiguous | 0.031 | Stabilizing | 0.593 | D | 0.397 | neutral | None | None | None | None | N |
N/Q | 0.3235 | likely_benign | 0.3291 | benign | -0.307 | Destabilizing | 0.027 | N | 0.215 | neutral | None | None | None | None | N |
N/R | 0.3098 | likely_benign | 0.3135 | benign | 0.148 | Stabilizing | 0.001 | N | 0.076 | neutral | None | None | None | None | N |
N/S | 0.0962 | likely_benign | 0.0969 | benign | -0.073 | Destabilizing | 0.101 | N | 0.334 | neutral | N | 0.464230524 | None | None | N |
N/T | 0.147 | likely_benign | 0.1511 | benign | 0.029 | Stabilizing | 0.002 | N | 0.129 | neutral | N | 0.511312395 | None | None | N |
N/V | 0.2693 | likely_benign | 0.2837 | benign | 0.031 | Stabilizing | 0.264 | N | 0.399 | neutral | None | None | None | None | N |
N/W | 0.788 | likely_pathogenic | 0.8027 | pathogenic | -0.642 | Destabilizing | 0.983 | D | 0.356 | neutral | None | None | None | None | N |
N/Y | 0.2044 | likely_benign | 0.2041 | benign | -0.359 | Destabilizing | 0.794 | D | 0.315 | neutral | N | 0.481255562 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.