Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5375 | 16348;16349;16350 | chr2:178733053;178733052;178733051 | chr2:179597780;179597779;179597778 |
N2AB | 5058 | 15397;15398;15399 | chr2:178733053;178733052;178733051 | chr2:179597780;179597779;179597778 |
N2A | 4131 | 12616;12617;12618 | chr2:178733053;178733052;178733051 | chr2:179597780;179597779;179597778 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.009 | N | 0.381 | 0.219 | 0.112648838833 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2847 | likely_benign | 0.2723 | benign | -0.494 | Destabilizing | 0.129 | N | 0.453 | neutral | None | None | None | None | N |
R/C | 0.1209 | likely_benign | 0.1162 | benign | -0.438 | Destabilizing | 0.983 | D | 0.495 | neutral | None | None | None | None | N |
R/D | 0.5043 | ambiguous | 0.4784 | ambiguous | -0.068 | Destabilizing | 0.418 | N | 0.512 | neutral | None | None | None | None | N |
R/E | 0.3077 | likely_benign | 0.2925 | benign | 0.016 | Stabilizing | 0.129 | N | 0.503 | neutral | None | None | None | None | N |
R/F | 0.3108 | likely_benign | 0.3041 | benign | -0.59 | Destabilizing | 0.716 | D | 0.509 | neutral | None | None | None | None | N |
R/G | 0.2082 | likely_benign | 0.1982 | benign | -0.746 | Destabilizing | 0.183 | N | 0.486 | neutral | N | 0.457351182 | None | None | N |
R/H | 0.0706 | likely_benign | 0.068 | benign | -1.171 | Destabilizing | 0.002 | N | 0.429 | neutral | None | None | None | None | N |
R/I | 0.182 | likely_benign | 0.172 | benign | 0.156 | Stabilizing | 0.794 | D | 0.536 | neutral | N | 0.454341605 | None | None | N |
R/K | 0.1122 | likely_benign | 0.1101 | benign | -0.518 | Destabilizing | 0.001 | N | 0.307 | neutral | N | 0.421037108 | None | None | N |
R/L | 0.1553 | likely_benign | 0.1504 | benign | 0.156 | Stabilizing | 0.418 | N | 0.512 | neutral | None | None | None | None | N |
R/M | 0.24 | likely_benign | 0.2308 | benign | -0.097 | Destabilizing | 0.94 | D | 0.519 | neutral | None | None | None | None | N |
R/N | 0.3599 | ambiguous | 0.337 | benign | -0.008 | Destabilizing | 0.264 | N | 0.501 | neutral | None | None | None | None | N |
R/P | 0.6397 | likely_pathogenic | 0.6259 | pathogenic | -0.039 | Destabilizing | 0.593 | D | 0.543 | neutral | None | None | None | None | N |
R/Q | 0.0875 | likely_benign | 0.0853 | benign | -0.223 | Destabilizing | 0.027 | N | 0.433 | neutral | None | None | None | None | N |
R/S | 0.2801 | likely_benign | 0.2619 | benign | -0.636 | Destabilizing | 0.009 | N | 0.381 | neutral | N | 0.453341527 | None | None | N |
R/T | 0.1714 | likely_benign | 0.1606 | benign | -0.395 | Destabilizing | 0.101 | N | 0.507 | neutral | N | 0.400120331 | None | None | N |
R/V | 0.2242 | likely_benign | 0.2174 | benign | -0.039 | Destabilizing | 0.418 | N | 0.522 | neutral | None | None | None | None | N |
R/W | 0.1429 | likely_benign | 0.139 | benign | -0.402 | Destabilizing | 0.983 | D | 0.519 | neutral | None | None | None | None | N |
R/Y | 0.2279 | likely_benign | 0.215 | benign | -0.05 | Destabilizing | 0.557 | D | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.