Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5377 | 16354;16355;16356 | chr2:178733047;178733046;178733045 | chr2:179597774;179597773;179597772 |
N2AB | 5060 | 15403;15404;15405 | chr2:178733047;178733046;178733045 | chr2:179597774;179597773;179597772 |
N2A | 4133 | 12622;12623;12624 | chr2:178733047;178733046;178733045 | chr2:179597774;179597773;179597772 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.997 | N | 0.765 | 0.54 | 0.714182674065 | gnomAD-4.0.0 | 1.59243E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3243 | likely_benign | 0.2961 | benign | -0.471 | Destabilizing | 0.977 | D | 0.656 | neutral | N | 0.507891741 | None | None | N |
D/C | 0.8232 | likely_pathogenic | 0.7915 | pathogenic | -0.19 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
D/E | 0.2081 | likely_benign | 0.1876 | benign | -0.758 | Destabilizing | 0.117 | N | 0.261 | neutral | N | 0.409997047 | None | None | N |
D/F | 0.7281 | likely_pathogenic | 0.6947 | pathogenic | None | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
D/G | 0.373 | ambiguous | 0.3373 | benign | -0.857 | Destabilizing | 0.989 | D | 0.635 | neutral | N | 0.483263701 | None | None | N |
D/H | 0.4713 | ambiguous | 0.4192 | ambiguous | -0.343 | Destabilizing | 0.999 | D | 0.802 | deleterious | N | 0.495637306 | None | None | N |
D/I | 0.5368 | ambiguous | 0.4889 | ambiguous | 0.557 | Stabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
D/K | 0.7371 | likely_pathogenic | 0.682 | pathogenic | -0.301 | Destabilizing | 0.99 | D | 0.701 | prob.neutral | None | None | None | None | N |
D/L | 0.5664 | likely_pathogenic | 0.5285 | ambiguous | 0.557 | Stabilizing | 0.995 | D | 0.774 | deleterious | None | None | None | None | N |
D/M | 0.7908 | likely_pathogenic | 0.7598 | pathogenic | 0.994 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
D/N | 0.1969 | likely_benign | 0.179 | benign | -0.832 | Destabilizing | 0.993 | D | 0.669 | neutral | N | 0.491575494 | None | None | N |
D/P | 0.9194 | likely_pathogenic | 0.927 | pathogenic | 0.24 | Stabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
D/Q | 0.5207 | ambiguous | 0.4721 | ambiguous | -0.661 | Destabilizing | 0.99 | D | 0.735 | prob.delet. | None | None | None | None | N |
D/R | 0.7056 | likely_pathogenic | 0.6525 | pathogenic | -0.157 | Destabilizing | 0.995 | D | 0.757 | deleterious | None | None | None | None | N |
D/S | 0.2339 | likely_benign | 0.211 | benign | -1.107 | Destabilizing | 0.983 | D | 0.555 | neutral | None | None | None | None | N |
D/T | 0.4039 | ambiguous | 0.3671 | ambiguous | -0.779 | Destabilizing | 0.995 | D | 0.719 | prob.delet. | None | None | None | None | N |
D/V | 0.3346 | likely_benign | 0.3 | benign | 0.24 | Stabilizing | 0.997 | D | 0.765 | deleterious | N | 0.48082257 | None | None | N |
D/W | 0.9395 | likely_pathogenic | 0.9304 | pathogenic | 0.182 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
D/Y | 0.3894 | ambiguous | 0.344 | ambiguous | 0.264 | Stabilizing | 1.0 | D | 0.819 | deleterious | D | 0.524362703 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.