Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5380 | 16363;16364;16365 | chr2:178733038;178733037;178733036 | chr2:179597765;179597764;179597763 |
N2AB | 5063 | 15412;15413;15414 | chr2:178733038;178733037;178733036 | chr2:179597765;179597764;179597763 |
N2A | 4136 | 12631;12632;12633 | chr2:178733038;178733037;178733036 | chr2:179597765;179597764;179597763 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs767107151 | -2.374 | 0.896 | N | 0.727 | 0.498 | 0.695068833554 | gnomAD-2.1.1 | 2.02E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.80426E-04 | None | 0 | None | 0 | 0 | 0 |
I/T | rs767107151 | -2.374 | 0.896 | N | 0.727 | 0.498 | 0.695068833554 | gnomAD-4.0.0 | 7.96105E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11247E-04 | None | 0 | 0 | 2.8592E-06 | 0 | 0 |
I/V | rs1280725528 | None | 0.004 | N | 0.233 | 0.112 | 0.348983352498 | gnomAD-4.0.0 | 1.59225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85923E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6271 | likely_pathogenic | 0.6655 | pathogenic | -2.15 | Highly Destabilizing | 0.702 | D | 0.706 | prob.neutral | None | None | None | None | N |
I/C | 0.9379 | likely_pathogenic | 0.9465 | pathogenic | -1.213 | Destabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | N |
I/D | 0.9963 | likely_pathogenic | 0.9961 | pathogenic | -2.178 | Highly Destabilizing | 0.996 | D | 0.854 | deleterious | None | None | None | None | N |
I/E | 0.9901 | likely_pathogenic | 0.9902 | pathogenic | -1.901 | Destabilizing | 0.988 | D | 0.845 | deleterious | None | None | None | None | N |
I/F | 0.4363 | ambiguous | 0.412 | ambiguous | -1.189 | Destabilizing | 0.968 | D | 0.771 | deleterious | N | 0.504126291 | None | None | N |
I/G | 0.9596 | likely_pathogenic | 0.962 | pathogenic | -2.731 | Highly Destabilizing | 0.988 | D | 0.826 | deleterious | None | None | None | None | N |
I/H | 0.9881 | likely_pathogenic | 0.9881 | pathogenic | -2.346 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
I/K | 0.9866 | likely_pathogenic | 0.9862 | pathogenic | -1.235 | Destabilizing | 0.988 | D | 0.848 | deleterious | None | None | None | None | N |
I/L | 0.1834 | likely_benign | 0.1875 | benign | -0.447 | Destabilizing | 0.437 | N | 0.389 | neutral | N | 0.46797349 | None | None | N |
I/M | 0.1756 | likely_benign | 0.1815 | benign | -0.484 | Destabilizing | 0.984 | D | 0.732 | prob.delet. | N | 0.499538439 | None | None | N |
I/N | 0.9529 | likely_pathogenic | 0.9545 | pathogenic | -1.681 | Destabilizing | 0.995 | D | 0.855 | deleterious | N | 0.517985089 | None | None | N |
I/P | 0.9804 | likely_pathogenic | 0.9795 | pathogenic | -0.998 | Destabilizing | 0.996 | D | 0.854 | deleterious | None | None | None | None | N |
I/Q | 0.9831 | likely_pathogenic | 0.9838 | pathogenic | -1.413 | Destabilizing | 0.996 | D | 0.849 | deleterious | None | None | None | None | N |
I/R | 0.9767 | likely_pathogenic | 0.976 | pathogenic | -1.302 | Destabilizing | 0.988 | D | 0.854 | deleterious | None | None | None | None | N |
I/S | 0.8771 | likely_pathogenic | 0.8894 | pathogenic | -2.393 | Highly Destabilizing | 0.984 | D | 0.813 | deleterious | D | 0.528715304 | None | None | N |
I/T | 0.6172 | likely_pathogenic | 0.6403 | pathogenic | -1.958 | Destabilizing | 0.896 | D | 0.727 | prob.delet. | N | 0.50747324 | None | None | N |
I/V | 0.088 | likely_benign | 0.0865 | benign | -0.998 | Destabilizing | 0.004 | N | 0.233 | neutral | N | 0.423286058 | None | None | N |
I/W | 0.9822 | likely_pathogenic | 0.9818 | pathogenic | -1.577 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
I/Y | 0.9237 | likely_pathogenic | 0.9153 | pathogenic | -1.249 | Destabilizing | 0.988 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.