Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5381 | 16366;16367;16368 | chr2:178733035;178733034;178733033 | chr2:179597762;179597761;179597760 |
N2AB | 5064 | 15415;15416;15417 | chr2:178733035;178733034;178733033 | chr2:179597762;179597761;179597760 |
N2A | 4137 | 12634;12635;12636 | chr2:178733035;178733034;178733033 | chr2:179597762;179597761;179597760 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.079 | N | 0.255 | 0.137 | 0.39162414616 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6668 | likely_pathogenic | 0.5671 | pathogenic | -0.607 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
A/D | 0.6809 | likely_pathogenic | 0.5384 | ambiguous | -0.259 | Destabilizing | 0.986 | D | 0.567 | neutral | None | None | None | None | N |
A/E | 0.5899 | likely_pathogenic | 0.4578 | ambiguous | -0.319 | Destabilizing | 0.939 | D | 0.565 | neutral | N | 0.414210789 | None | None | N |
A/F | 0.5234 | ambiguous | 0.4312 | ambiguous | -0.633 | Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
A/G | 0.2173 | likely_benign | 0.1849 | benign | -0.62 | Destabilizing | 0.76 | D | 0.483 | neutral | N | 0.446248636 | None | None | N |
A/H | 0.6757 | likely_pathogenic | 0.571 | pathogenic | -0.649 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
A/I | 0.4348 | ambiguous | 0.3275 | benign | -0.054 | Destabilizing | 0.993 | D | 0.62 | neutral | None | None | None | None | N |
A/K | 0.7608 | likely_pathogenic | 0.6398 | pathogenic | -0.695 | Destabilizing | 0.953 | D | 0.557 | neutral | None | None | None | None | N |
A/L | 0.3155 | likely_benign | 0.2435 | benign | -0.054 | Destabilizing | 0.953 | D | 0.554 | neutral | None | None | None | None | N |
A/M | 0.3503 | ambiguous | 0.2745 | benign | -0.206 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
A/N | 0.4746 | ambiguous | 0.3731 | ambiguous | -0.412 | Destabilizing | 0.986 | D | 0.572 | neutral | None | None | None | None | N |
A/P | 0.9341 | likely_pathogenic | 0.8999 | pathogenic | -0.136 | Destabilizing | 0.991 | D | 0.62 | neutral | N | 0.484758185 | None | None | N |
A/Q | 0.5386 | ambiguous | 0.456 | ambiguous | -0.544 | Destabilizing | 0.993 | D | 0.644 | neutral | None | None | None | None | N |
A/R | 0.6486 | likely_pathogenic | 0.5315 | ambiguous | -0.392 | Destabilizing | 0.986 | D | 0.631 | neutral | None | None | None | None | N |
A/S | 0.1015 | likely_benign | 0.0865 | benign | -0.76 | Destabilizing | 0.079 | N | 0.255 | neutral | N | 0.399377409 | None | None | N |
A/T | 0.1211 | likely_benign | 0.0859 | benign | -0.712 | Destabilizing | 0.885 | D | 0.454 | neutral | N | 0.434740776 | None | None | N |
A/V | 0.2296 | likely_benign | 0.1704 | benign | -0.136 | Destabilizing | 0.939 | D | 0.531 | neutral | N | 0.460447297 | None | None | N |
A/W | 0.8809 | likely_pathogenic | 0.8138 | pathogenic | -0.922 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
A/Y | 0.6963 | likely_pathogenic | 0.5876 | pathogenic | -0.499 | Destabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.