Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5382 | 16369;16370;16371 | chr2:178733032;178733031;178733030 | chr2:179597759;179597758;179597757 |
N2AB | 5065 | 15418;15419;15420 | chr2:178733032;178733031;178733030 | chr2:179597759;179597758;179597757 |
N2A | 4138 | 12637;12638;12639 | chr2:178733032;178733031;178733030 | chr2:179597759;179597758;179597757 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 1.0 | D | 0.833 | 0.574 | 0.647653543843 | gnomAD-4.0.0 | 6.84355E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99549E-07 | 0 | 0 |
G/V | None | None | 1.0 | D | 0.781 | 0.602 | 0.784472299234 | gnomAD-4.0.0 | 6.84355E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99549E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.8287 | likely_pathogenic | 0.8201 | pathogenic | -0.28 | Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.559518153 | None | None | I |
G/C | 0.9836 | likely_pathogenic | 0.9827 | pathogenic | -0.633 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | D | 0.629560439 | None | None | I |
G/D | 0.9955 | likely_pathogenic | 0.9951 | pathogenic | -0.471 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.653887725 | None | None | I |
G/E | 0.9969 | likely_pathogenic | 0.9968 | pathogenic | -0.586 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
G/F | 0.9975 | likely_pathogenic | 0.9973 | pathogenic | -0.836 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
G/H | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -0.652 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | I |
G/I | 0.9952 | likely_pathogenic | 0.9951 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
G/K | 0.9986 | likely_pathogenic | 0.9984 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
G/L | 0.9956 | likely_pathogenic | 0.9955 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
G/M | 0.9979 | likely_pathogenic | 0.9981 | pathogenic | -0.372 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
G/N | 0.9964 | likely_pathogenic | 0.9964 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
G/P | 0.9984 | likely_pathogenic | 0.9984 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
G/Q | 0.9971 | likely_pathogenic | 0.9972 | pathogenic | -0.602 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
G/R | 0.9941 | likely_pathogenic | 0.993 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.638443416 | None | None | I |
G/S | 0.8567 | likely_pathogenic | 0.8754 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.570045925 | None | None | I |
G/T | 0.9801 | likely_pathogenic | 0.984 | pathogenic | -0.607 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
G/V | 0.9851 | likely_pathogenic | 0.9848 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.62915683 | None | None | I |
G/W | 0.9965 | likely_pathogenic | 0.9962 | pathogenic | -1.092 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
G/Y | 0.9976 | likely_pathogenic | 0.9974 | pathogenic | -0.691 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.