Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5385 | 16378;16379;16380 | chr2:178733023;178733022;178733021 | chr2:179597750;179597749;179597748 |
N2AB | 5068 | 15427;15428;15429 | chr2:178733023;178733022;178733021 | chr2:179597750;179597749;179597748 |
N2A | 4141 | 12646;12647;12648 | chr2:178733023;178733022;178733021 | chr2:179597750;179597749;179597748 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs368729048 | 0.026 | 0.996 | N | 0.586 | 0.421 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
P/A | rs368729048 | 0.026 | 0.996 | N | 0.586 | 0.421 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/A | rs368729048 | 0.026 | 0.996 | N | 0.586 | 0.421 | None | gnomAD-4.0.0 | 6.08985E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.22956E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7683 | likely_pathogenic | 0.7814 | pathogenic | -0.34 | Destabilizing | 0.996 | D | 0.586 | neutral | N | 0.485679557 | None | None | I |
P/C | 0.9872 | likely_pathogenic | 0.9881 | pathogenic | -0.585 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
P/D | 0.9438 | likely_pathogenic | 0.9511 | pathogenic | -0.191 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
P/E | 0.9282 | likely_pathogenic | 0.935 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
P/F | 0.9861 | likely_pathogenic | 0.9869 | pathogenic | -0.663 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
P/G | 0.8904 | likely_pathogenic | 0.902 | pathogenic | -0.442 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
P/H | 0.9186 | likely_pathogenic | 0.9233 | pathogenic | -0.059 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.521193731 | None | None | I |
P/I | 0.9747 | likely_pathogenic | 0.9755 | pathogenic | -0.227 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | I |
P/K | 0.9608 | likely_pathogenic | 0.9649 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
P/L | 0.8442 | likely_pathogenic | 0.8445 | pathogenic | -0.227 | Destabilizing | 0.998 | D | 0.665 | neutral | N | 0.483401832 | None | None | I |
P/M | 0.9706 | likely_pathogenic | 0.9718 | pathogenic | -0.346 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
P/N | 0.9317 | likely_pathogenic | 0.9383 | pathogenic | -0.013 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
P/Q | 0.8849 | likely_pathogenic | 0.8935 | pathogenic | -0.262 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
P/R | 0.8999 | likely_pathogenic | 0.909 | pathogenic | 0.186 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | D | 0.526728218 | None | None | I |
P/S | 0.8546 | likely_pathogenic | 0.862 | pathogenic | -0.355 | Destabilizing | 0.999 | D | 0.669 | neutral | N | 0.488237224 | None | None | I |
P/T | 0.8428 | likely_pathogenic | 0.8453 | pathogenic | -0.38 | Destabilizing | 0.999 | D | 0.642 | neutral | D | 0.522282403 | None | None | I |
P/V | 0.9397 | likely_pathogenic | 0.9418 | pathogenic | -0.232 | Destabilizing | 0.91 | D | 0.474 | neutral | None | None | None | None | I |
P/W | 0.9919 | likely_pathogenic | 0.993 | pathogenic | -0.731 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
P/Y | 0.9797 | likely_pathogenic | 0.9816 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.