Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5389 | 16390;16391;16392 | chr2:178733011;178733010;178733009 | chr2:179597738;179597737;179597736 |
N2AB | 5072 | 15439;15440;15441 | chr2:178733011;178733010;178733009 | chr2:179597738;179597737;179597736 |
N2A | 4145 | 12658;12659;12660 | chr2:178733011;178733010;178733009 | chr2:179597738;179597737;179597736 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs780968460 | -0.286 | 0.667 | N | 0.713 | 0.424 | 0.702110701905 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
S/F | rs780968460 | -0.286 | 0.667 | N | 0.713 | 0.424 | 0.702110701905 | gnomAD-4.0.0 | 3.18385E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85878E-06 | 1.43303E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0767 | likely_benign | 0.082 | benign | -0.637 | Destabilizing | None | N | 0.329 | neutral | D | 0.52725108 | None | None | N |
S/C | 0.1203 | likely_benign | 0.1162 | benign | -0.312 | Destabilizing | 0.883 | D | 0.673 | neutral | N | 0.501931523 | None | None | N |
S/D | 0.4358 | ambiguous | 0.4485 | ambiguous | -0.212 | Destabilizing | 0.567 | D | 0.584 | neutral | None | None | None | None | N |
S/E | 0.4829 | ambiguous | 0.4988 | ambiguous | -0.116 | Destabilizing | 0.272 | N | 0.589 | neutral | None | None | None | None | N |
S/F | 0.1555 | likely_benign | 0.1618 | benign | -0.6 | Destabilizing | 0.667 | D | 0.713 | prob.delet. | N | 0.496246757 | None | None | N |
S/G | 0.1212 | likely_benign | 0.1266 | benign | -0.97 | Destabilizing | 0.072 | N | 0.579 | neutral | None | None | None | None | N |
S/H | 0.3099 | likely_benign | 0.2996 | benign | -1.213 | Destabilizing | 0.968 | D | 0.673 | neutral | None | None | None | None | N |
S/I | 0.1674 | likely_benign | 0.1715 | benign | 0.167 | Stabilizing | 0.567 | D | 0.683 | prob.neutral | None | None | None | None | N |
S/K | 0.6193 | likely_pathogenic | 0.6076 | pathogenic | -0.284 | Destabilizing | 0.272 | N | 0.588 | neutral | None | None | None | None | N |
S/L | 0.0967 | likely_benign | 0.0997 | benign | 0.167 | Stabilizing | 0.157 | N | 0.623 | neutral | None | None | None | None | N |
S/M | 0.1903 | likely_benign | 0.2018 | benign | 0.15 | Stabilizing | 0.909 | D | 0.674 | neutral | None | None | None | None | N |
S/N | 0.1736 | likely_benign | 0.1709 | benign | -0.556 | Destabilizing | 0.726 | D | 0.587 | neutral | None | None | None | None | N |
S/P | 0.9086 | likely_pathogenic | 0.9193 | pathogenic | -0.066 | Destabilizing | 0.497 | N | 0.673 | neutral | D | 0.52792259 | None | None | N |
S/Q | 0.4375 | ambiguous | 0.4341 | ambiguous | -0.482 | Destabilizing | 0.726 | D | 0.606 | neutral | None | None | None | None | N |
S/R | 0.4963 | ambiguous | 0.4788 | ambiguous | -0.377 | Destabilizing | 0.567 | D | 0.679 | prob.neutral | None | None | None | None | N |
S/T | 0.0819 | likely_benign | 0.0814 | benign | -0.472 | Destabilizing | 0.124 | N | 0.571 | neutral | N | 0.448270221 | None | None | N |
S/V | 0.1506 | likely_benign | 0.16 | benign | -0.066 | Destabilizing | 0.157 | N | 0.635 | neutral | None | None | None | None | N |
S/W | 0.3104 | likely_benign | 0.3102 | benign | -0.7 | Destabilizing | 0.968 | D | 0.718 | prob.delet. | None | None | None | None | N |
S/Y | 0.1656 | likely_benign | 0.1666 | benign | -0.334 | Destabilizing | 0.667 | D | 0.719 | prob.delet. | D | 0.530427458 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.