Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5395 | 16408;16409;16410 | chr2:178732993;178732992;178732991 | chr2:179597720;179597719;179597718 |
N2AB | 5078 | 15457;15458;15459 | chr2:178732993;178732992;178732991 | chr2:179597720;179597719;179597718 |
N2A | 4151 | 12676;12677;12678 | chr2:178732993;178732992;178732991 | chr2:179597720;179597719;179597718 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.012 | N | 0.311 | 0.24 | 0.305730143919 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2075 | likely_benign | 0.2084 | benign | -0.073 | Destabilizing | 0.016 | N | 0.354 | neutral | None | None | None | None | N |
K/C | 0.541 | ambiguous | 0.499 | ambiguous | -0.45 | Destabilizing | 0.864 | D | 0.316 | neutral | None | None | None | None | N |
K/D | 0.309 | likely_benign | 0.3206 | benign | 0.092 | Stabilizing | 0.038 | N | 0.361 | neutral | None | None | None | None | N |
K/E | 0.0896 | likely_benign | 0.0927 | benign | 0.129 | Stabilizing | 0.012 | N | 0.311 | neutral | N | 0.501600487 | None | None | N |
K/F | 0.5234 | ambiguous | 0.5071 | ambiguous | -0.177 | Destabilizing | 0.356 | N | 0.346 | neutral | None | None | None | None | N |
K/G | 0.3089 | likely_benign | 0.2875 | benign | -0.298 | Destabilizing | 0.016 | N | 0.379 | neutral | None | None | None | None | N |
K/H | 0.2085 | likely_benign | 0.2021 | benign | -0.46 | Destabilizing | 0.001 | N | 0.236 | neutral | None | None | None | None | N |
K/I | 0.1789 | likely_benign | 0.1788 | benign | 0.448 | Stabilizing | 0.029 | N | 0.412 | neutral | N | 0.50941468 | None | None | N |
K/L | 0.2056 | likely_benign | 0.1992 | benign | 0.448 | Stabilizing | 0.016 | N | 0.376 | neutral | None | None | None | None | N |
K/M | 0.135 | likely_benign | 0.1377 | benign | 0.045 | Stabilizing | 0.356 | N | 0.31 | neutral | None | None | None | None | N |
K/N | 0.1847 | likely_benign | 0.1905 | benign | -0.086 | Destabilizing | None | N | 0.196 | neutral | D | 0.534753055 | None | None | N |
K/P | 0.8419 | likely_pathogenic | 0.8314 | pathogenic | 0.303 | Stabilizing | 0.136 | N | 0.389 | neutral | None | None | None | None | N |
K/Q | 0.0878 | likely_benign | 0.0863 | benign | -0.167 | Destabilizing | 0.002 | N | 0.154 | neutral | N | 0.47045086 | None | None | N |
K/R | 0.0744 | likely_benign | 0.0704 | benign | -0.156 | Destabilizing | None | N | 0.189 | neutral | N | 0.503699429 | None | None | N |
K/S | 0.2192 | likely_benign | 0.223 | benign | -0.566 | Destabilizing | 0.016 | N | 0.278 | neutral | None | None | None | None | N |
K/T | 0.1111 | likely_benign | 0.114 | benign | -0.367 | Destabilizing | 0.001 | N | 0.221 | neutral | D | 0.53134739 | None | None | N |
K/V | 0.1609 | likely_benign | 0.1654 | benign | 0.303 | Stabilizing | 0.001 | N | 0.252 | neutral | None | None | None | None | N |
K/W | 0.5955 | likely_pathogenic | 0.5375 | ambiguous | -0.208 | Destabilizing | 0.864 | D | 0.334 | neutral | None | None | None | None | N |
K/Y | 0.432 | ambiguous | 0.4081 | ambiguous | 0.135 | Stabilizing | 0.214 | N | 0.379 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.