Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5396 | 16411;16412;16413 | chr2:178732990;178732989;178732988 | chr2:179597717;179597716;179597715 |
N2AB | 5079 | 15460;15461;15462 | chr2:178732990;178732989;178732988 | chr2:179597717;179597716;179597715 |
N2A | 4152 | 12679;12680;12681 | chr2:178732990;178732989;178732988 | chr2:179597717;179597716;179597715 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs780211454 | 0.582 | 0.978 | N | 0.535 | 0.341 | 0.338110398507 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
E/K | rs780211454 | 0.582 | 0.978 | N | 0.535 | 0.341 | 0.338110398507 | gnomAD-4.0.0 | 1.59178E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1629 | likely_benign | 0.1605 | benign | -0.642 | Destabilizing | 0.989 | D | 0.532 | neutral | N | 0.474261957 | None | None | N |
E/C | 0.899 | likely_pathogenic | 0.895 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/D | 0.2166 | likely_benign | 0.2253 | benign | -0.538 | Destabilizing | 0.121 | N | 0.315 | neutral | N | 0.487671184 | None | None | N |
E/F | 0.8579 | likely_pathogenic | 0.8662 | pathogenic | -0.084 | Destabilizing | 0.995 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/G | 0.2631 | likely_benign | 0.2677 | benign | -0.911 | Destabilizing | 0.978 | D | 0.524 | neutral | N | 0.512916345 | None | None | N |
E/H | 0.6057 | likely_pathogenic | 0.6111 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.533 | neutral | None | None | None | None | N |
E/I | 0.392 | ambiguous | 0.4005 | ambiguous | 0.065 | Stabilizing | 0.99 | D | 0.667 | neutral | None | None | None | None | N |
E/K | 0.1928 | likely_benign | 0.1852 | benign | 0.058 | Stabilizing | 0.978 | D | 0.535 | neutral | N | 0.464871682 | None | None | N |
E/L | 0.3969 | ambiguous | 0.392 | ambiguous | 0.065 | Stabilizing | 0.296 | N | 0.409 | neutral | None | None | None | None | N |
E/M | 0.4678 | ambiguous | 0.4694 | ambiguous | 0.117 | Stabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
E/N | 0.369 | ambiguous | 0.3807 | ambiguous | -0.587 | Destabilizing | 0.995 | D | 0.512 | neutral | None | None | None | None | N |
E/P | 0.3743 | ambiguous | 0.354 | ambiguous | -0.151 | Destabilizing | 0.999 | D | 0.59 | neutral | None | None | None | None | N |
E/Q | 0.1698 | likely_benign | 0.1679 | benign | -0.49 | Destabilizing | 0.997 | D | 0.511 | neutral | N | 0.479745134 | None | None | N |
E/R | 0.3307 | likely_benign | 0.3254 | benign | 0.466 | Stabilizing | 0.998 | D | 0.54 | neutral | None | None | None | None | N |
E/S | 0.3483 | ambiguous | 0.3575 | ambiguous | -0.751 | Destabilizing | 0.983 | D | 0.507 | neutral | None | None | None | None | N |
E/T | 0.3232 | likely_benign | 0.3376 | benign | -0.517 | Destabilizing | 0.998 | D | 0.519 | neutral | None | None | None | None | N |
E/V | 0.2218 | likely_benign | 0.225 | benign | -0.151 | Destabilizing | 0.956 | D | 0.529 | neutral | N | 0.47953449 | None | None | N |
E/W | 0.9406 | likely_pathogenic | 0.9445 | pathogenic | 0.223 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/Y | 0.7391 | likely_pathogenic | 0.7434 | pathogenic | 0.194 | Stabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.